Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Catharanthus longifolius

ABSTRACT: Catharanthus longifolius overview

PROVIDER: PRJNA178690 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR610342.fastq.gz	Fastqsanger.gz
	SRR866655_1.fastq.gz	Fastqsanger.gz
	SRR866655_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Catharanthus ovalis

Project description:Catharanthus ovalis overview

| PRJNA178691 | ENA

Catharanthus roseus

Project description:Catharanthus roseus Organism overview

| PRJNA84081 | ENA

Catharanthus Transcriptome and Gene Expression

2014-07-29 | GSE57326 | GEO

Catharanthus Transcriptome and Gene Expression

Project description:In this study, we aim to present a global transcriptome analysis of medicinal plant, Catharanthus roseus. We generated about 343 million high-quality reads from three tissues (leaf, root and flower) using Illumina platform. We performed an optimized de novo assembly of the reads and estimated transcript abundance in different tissue samples. The transcriptome dynamics was studied by differential gene expression analyses among tissue samples. We collected different tissue samples from the mature plants. Total RNA isolated from these tissue samples was subjected to Illumina sequencing. The sequence data was further filtered using NGS QC Toolkit to obtain high-quality reads. The filtered reads were used for de novo assembly optimization. The reads were further mapped to the Catharanthus transcripts via CLC Genomics Workbench and differential gene expression analysis was performed using DESeq software.

2014-07-29 | E-GEOD-57326 | biostudies-arrayexpress

Transcriptomic analysis of leaves and leaf cells from the medicinal plant Catharanthus roseus

Project description:The goal of this study is to investigate differential transcription profiles of leaf material/cells accumulating different levels of alkaloids in the anticancer plant Catharanthus roseus.

2023-10-16 | GSE217852 | GEO

Catharanthus roseus

Project description:Catharanthus roseus Variation

| PRJNA420184 | ENA

Catharanthus roseus

Project description:Catharanthus roseus Assembly

| PRJNA841429 | ENA

catharanthus roseus

Project description:catharanthus roseus Transcriptome

| PRJNA415349 | ENA

catharanthus roseus

Project description:catharanthus roseus Raw sequence reads