Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Nevskia ramosa DSM 11499

ABSTRACT: Nevskia ramosa DSM 11499

PROVIDER: PRJNA185605 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ATVI01.dat.gz	Other
	ATVI01.fasta.gz	Fasta.gz
	ATVI01.master.dat	Other
	SRR896289_1.fastq.gz	Fastqsanger.gz
	SRR896289_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Thomasclavelia ramosa DSM 1402

Project description:Thomasclavelia ramosa DSM 1402 Genome sequencing and assembly

| PRJNA523323 | ENA

Transcriptomic analysis of haustorium formation in Phelipanche ramosa

Project description:The parasitic lifestyle of parasitic plants relies on the development of a haustorium, a specific infectious organ required for attachment to host roots. While haustorium development is initiated upon chemodetection of host-derived molecules in hemiparasitic plants, the induction of haustorium formation remains largely misunderstood in holoparasitic species such as Phelipanche ramosa. This work demonstrates that the root exudates of the host plant Brassica napus contain allelochemicals displaying a haustorium-inducing activity on P. ramosa germinating seeds which increases the parasite aggressiveness. A de novo assembled P. ramosa transcriptome and a microarray approach during early haustorium formation upon treatment with B. napus root exudates allowed the identification of differentially expressed genes involved in hormone signaling. Bioassays using exogenous cytokinins and the specific cytokinin receptor inhibitor PI55 showed that cytokinins induced haustorium formation and increased parasite aggressiveness. Root exudates triggered the expression of cytokinin responsive genes during early haustorium development in germinated seeds and bio-guided UPLC-MS analysis showed that these exudates contain a cytokinin with dihydrozeatin characteristics. These results suggest that cytokinins constitutively exudated from host roots play a major role in haustorium formation and aggressiveness in P. ramosa.

2017-05-27 | GSE99377 | GEO

Nevskia ramosa

Project description:Nevskia ramosa overview

| PRJNA185899 | ENA

Phelipanche ramosa

Project description:Phelipanche ramosa overview

| PRJNA388351 | ENA

Lichtheimia ramosa

Project description:Lichtheimia ramosa Genome sequencing

| PRJNA341519 | ENA

Expression analysis of strains Lactococcus lactis KCTC 3769T, L. raffinolactis DSM 20443T, L. plantarum DSM 20686T, L. fujiensis JSM 16395T, L. garvieae KCTC 3772T, L. piscium DSM 6634T and L. chungangensis CAU 28T

2014-05-28 | GSE58002 | GEO

Phelipanche ramosa

Project description:Phelipanche ramosa seed and soil metagenome

| PRJNA589539 | ENA

Project description:Investigation of whole genome gene expression level changes in Lactococcus lactis KCTC 3769T,L. raffinolactis DSM 20443T, L. plantarum DSM 20686T, L. fujiensis JSM 16395T, L. garvieae KCTC 3772T, L. piscium DSM 6634T and L. chungangensis CAU 28T . This proves that transcriptional profiling can facilitate in elucidating the genetic distance between closely related strains. A one chip study using total RNA recovered from of L. raffinolactis DSM 20443T, L. plantarum DSM 20686T, L. fujiensis JSM 16395T, L. garvieae KCTC 3772T, L. piscium DSM 6634T and L. chungangensis CAU 28T . For the the transcriptome of of L. raffinolactis DSM 20443T, L. plantarum DSM 20686T, L. fujiensis JSM 16395T, L. garvieae KCTC 3772T, L. piscium DSM 6634T and L. chungangensis CAU 28T was analyzed using the Lactococcus lactis KCTC 3769T microarray platform

2014-05-28 | E-GEOD-58002 | biostudies-arrayexpress

Phelipanche ramosa

Project description:Transcriptomic analysis of haustorium formation in Phelipanche ramosa

| PRJNA388225 | ENA

Lichtheimia ramosa isolate:KPH11

Project description:Lichtheimia ramosa isolate:KPH11 Genome sequencing

| PRJNA487495 | ENA