Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Alectoris chukar

ABSTRACT: Alectoris chukar overview

PROVIDER: PRJNA194300 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17786794_1.fastq.gz	Fastqsanger.gz
	SRR17786794_2.fastq.gz	Fastqsanger.gz
	SRR17786795_1.fastq.gz	Fastqsanger.gz
	SRR17786795_2.fastq.gz	Fastqsanger.gz
	SRR17786796_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Alectoris chukar

Project description:Alectoris chukar

| PRJNA850007 | ENA

Alectoris chukar breed:chukar

Project description:Alectoris chukar breed:chukar Genome sequencing

| PRJNA674730 | ENA

Alectoris chukar

Project description:Alectoris chukar Genome sequencing

| PRJNA780238 | ENA

Genome assembly of Alectoris Chukar

Project description:Alectoris Chukar genome assembly

| PRJEB70927 | ENA

Alectoris chukar breed:Iraqi Alectoris chukar

Project description:The maternal phylogeny and genomic characterization of the Iraqi chukar partridge (Alectoris chukar) using whole genome sequencing (WGS) data

| PRJNA801142 | ENA

Alectoris rufa

Project description:Alectoris rufa overview

| PRJNA328531 | ENA

Alectoris magna

Project description:Alectoris magna overview

| PRJNA945555 | ENA

Population Genotyping of Alectoris Chukar

Project description:We have re-sequenced the genomes of 58 Alectoris Chukar from China

2023-12-18 | PRJEB71339 | EVA

New Evidences of Mitochondrial DNA Heteroplasmy by Putative Paternal Leakage between the Rock Partridge (Alectoris graeca) and the Chukar Partridge (Alectoris chukar).

Project description:The rock partridge, Alectoris graeca, is a polytypic species declining in Italy mostly due to anthropogenic causes, including the massive releases of the closely related allochthonous chukar partridge Alectoris chukar which produced the formation of hybrids. Molecular approaches are fundamental for the identification of evolutionary units in the perspective of conservation and management, and to correctly select individuals to be used in restocking campaigns. We analyzed a Cytochrome oxidase I (COI) fragment of contemporary and historical A. graeca and A. chukar samples, using duplicated analyses to confirm results and nuclear DNA microsatellites to exclude possible sample cross-contamination. In two contemporary specimens of A. graeca, collected from an anthropogenic hybrid zone, we found evidence of the presence of mtDNA heteroplasmy possibly associated to paternal leakage and suggesting hybridization with captive-bred exotic A. chukar. These results underline significant limitations in the reliability of mtDNA barcoding-based species identification and could have relevant evolutionary and ecological implications that should be accounted for when interpreting data aimed to support conservation actions.

| S-EPMC5256862 | biostudies-literature

The complete mitochondrial genome of Helan Mountain chukar <i>Alectoris chukar potanini</i> (Galliformes: Phasianidae).

Project description:The complete mitochondrial genome of Helan Mountain chukar (Alectoris chukar potanini) was first determined. The genome was 16,685 bp in length, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a putative control region. The phylogenetic analysis based on the complete mitochondrial genome sequences revealed a close relationship between A. chukar potanini and Tetraogallus tibetanus. This work is expected to provide a set of fundamental data on further genetic studies of this protected species.

| S-EPMC7687578 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data