Project description:Investigation of whole genome gene expression level changes in Yersinia intermedia strain ATCC 29909 in response to oxygen. The experiments and results have not been published yet (manuscript has been submitted to journal office and is under revision) A 6 chip (whole-genome-tiled array) study using total RNA recovered from the following: 6 separate cultures of Yersinia intermedia strain ATCC 29909 grown in minimal medium with glucose (3 grown in the presence of oxygen and 3 grown without oxygen). Each whole-genome-tiled arrays contained ~320,000 probes representing 3953 genes that included 3887 protein coding genes (and 18 likely pseudogenes), 12 non-coding RNAs and 36 tRNAs. Data from probes corresponding to intergenic regions (and some pseudogenes, rRNA genes and unannotated genes) of the genome were not considered in the present analysis.

2013-08-21 | E-GEOD-50043 | biostudies-arrayexpress

Role of OxyR in Prevotella intermedia

Project description:Wild type Prevotella intermedia OMA14 strain (V3203) was used to compare to the OxyR-deficient strain (V3147).

2021-03-31 | GSE168003 | GEO

Brachyspira hyodysenteriae ATCC 27164 strain:B78

Project description:Brachyspira hyodysenteriae ATCC 27164 strain:B78 Genome sequencing and assembly

| PRJNA183036 | ENA

Thiomonas intermedia strain:ATCC 15466

Project description:Thiomonas intermedia strain:ATCC 15466 Genome sequencing and assembly

| PRJNA359731 | ENA

Prevotella intermedia strain:ATCC 49046

Project description:Prevotella intermedia strain:ATCC 49046 Genome sequencing and assembly

| PRJNA281562 | ENA

Brachyspira alvinipulli ATCC 51933

Project description:Brachyspira alvinipulli ATCC 51933 Genome sequencing and assembly

| PRJNA223014 | ENA

Brachyspira hyodysenteriae ATCC 27164

Project description:Brachyspira hyodysenteriae ATCC 27164 Genome sequencing and assembly

| PRJNA322728 | ENA

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