Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Notophthalmus viridescens

ABSTRACT: High-throughput sequencing for microRNAs in uninjured and regenerating newt hearts

PROVIDER: PRJNA200731 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR836299.fastq.gz	Fastqsanger.gz
	SRR836300.fastq.gz	Fastqsanger.gz
	SRR836301.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Microarray Analysis of microRNA Expression during Notophthalmus viridescens (red-spotted newt) heart regeneration

Project description:The adult vertebrate red spotted newt is a champion of regeneration, demonstrating an amazing ability to regenerate damaged organs and tissues back to an uninjured state without the formation of scar or reduction in function. By developing a novel cardiac resection strategy, our group recently demonstrated that newt hearts could morphologically and functionally regenerate, without scarring, within a period of 2-3 months following injury. MicroRNAs (miRs) have been widely publicized as essential post-transcriptional gene regulators in a variety of biological processes, including regeneration. We have conducted a microarray screen for vertebrate miRs, with several candidate miRs showing significant differential expression at important time-points following injury to the newt heart. The newt microRNA expression between uninjured hearts and regenerating hearts, 7 and 21 days post-injury (dpi), was compared by microarray analysis. Three paired samples were analyzed: Uninjured, 7dpi and 21dpi newt hearts. Three arrays were hybridized comparing two-paired samples each time.

2013-09-24 | E-GEOD-44547 | biostudies-arrayexpress

Microarray Analysis of microRNA Expression during Notophthalmus viridescens (red-spotted newt) heart regeneration

2013-09-24 | GSE44547 | GEO

Notophthalmus viridescens

Project description:MicroRNA sequencing and analysis of the newt heart

| PRJNA285806 | ENA

Comparative transcriptome analysis of transgenic Drosophila misexpressing novel Notophthalmus viridescens (newt) genes

Project description:To obtain a quick glimpse into possible function of five novel Notopthalmus viridescens (newt) genes (and given certain restrains with transgenic newts, such as time) we express these genes using transgenic Drosophila melanogaster. We generated the transgenic flies containing newt candidate genes, and prepared samples for RNA sequencing to evaluate the overall role of candidate genes in tissue development and layout map for future studies.

2021-11-03 | GSE134348 | GEO

Notophthalmus viridescens

Project description:Microarray Analysis of microRNA Expression during Notophthalmus viridescens (red-spotted newt) heart regeneration

| PRJNA190051 | ENA

Modulation of tissue repair by regeneration enhancer elements.

Project description:We compared transcriptional and chromatin profiles of regenerating zebrafish hearts following genetic ablation with profiles from uninjured zebrafish hearts.

2016-04-08 | GSE75894 | GEO

Notophthalmus viridescens

Project description:Notophthalmus viridescens overview

| PRJNA191824 | ENA

Notophthalmus viridescens

Project description:Notophthalmus viridescens Transcriptome or Gene expression

| PRJNA272599 | ENA

Notophthalmus viridescens

Project description:Notophthalmus viridescens Transcriptome or Gene expression

| PRJNA305738 | ENA

Notophthalmus viridescens

Project description:Notophthalmus viridescens Raw sequence reads