Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Morus notabilis

ABSTRACT: Morus notabilis Genome sequencing and assembly

PROVIDER: PRJNA202089 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ATGF01.dat.gz	Other
	ATGF01.fasta.gz	Fasta.gz
	ATGF01.master.dat	Other
	SRR847534_1.fastq.gz	Fastqsanger.gz
	SRR847534_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 28

Similar Datasets

Morus notabilis cultivar:notabilis

Project description:Morus notabilis cultivar:notabilis Genome sequencing

| PRJNA1128357 | ENA

Morus notabilis

Project description:Morus notabilis

| PRJNA773133 | ENA

Morus notabilis

Project description:Morus notabilis overview

| PRJNA202462 | ENA

Morus notabilis

Project description:Morus notabilis Raw sequence reads

| PRJNA1098456 | ENA

Morus notabilis

Project description:Morus notabilis Small RNA Transcriptome

| PRJNA227259 | ENA

Morus notabilis

Project description:Morus notabilis Transcriptome or Gene expression

| PRJNA243118 | ENA

The Small RNA Profile of Silkworm Hemolymph Using Deep Sequencing

Project description:Human utilization of the mulberry-silkworm interaction started at least 5,000 years ago and greatly influenced world history through the Silk Road. Complementing the silkworm genome sequence, here we describe the genome of a mulberry species (Morus notabilis C. K. Schneider). In the 330 Mb genome assembly of M. notabilis, we identified 128 Mb of repetitive sequences and 29,338 genes, 60.8% of which were supported by transcriptome sequencing. Mulberry gene sequences appear to evolve ~3 times faster than other Rosales, perhaps facilitating its spread to Europe, Africa, and America. It is among few eudicots but several Rosales not preserving genome duplications in more than 100 million years – however neopolyploid series in mulberry and several others suggest that new duplications may confer benefits. Strikingly, five predicted mulberry miRNAs were found in the hemolymph and silkglands of silkworm, suggesting profound molecular level interactions that promise to expand knowledge of plant-herbivore relationship which constitute key elements of most terrestrial habitats. In addition, we investigated the characters of hemolymph small RNA. small mRNA profiles of silkworm hemolymph in the fifth instar day-5 silkworm were generated by deep sequencing, in twice, using Illumina Hiseq 2000.

2013-09-12 | E-GEOD-48168 | biostudies-arrayexpress

Nestor notabilis

Project description:Nestor notabilis Genome sequencing and assembly

| PRJNA704014 | ENA

Nestor notabilis

Project description:Nestor notabilis Genome sequencing and assembly

| PRJNA212900 | ENA

The Small RNA Profile of Silkworm Hemolymph Using Deep Sequencing

2013-09-12 | GSE48168 | GEO