Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Zootermopsis nevadensis

ABSTRACT: Zootermopsis nevadensis Transcriptome or Gene expression

PROVIDER: PRJNA203244 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1167040_1.fastq.gz	Fastqsanger.gz
	SRR1167040_2.fastq.gz	Fastqsanger.gz
	SRR1167041_1.fastq.gz	Fastqsanger.gz
	SRR1167041_2.fastq.gz	Fastqsanger.gz
	SRR1167042_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 52

Similar Datasets

Zootermopsis nevadensis

Project description:Zootermopsis nevadensis overview

| PRJNA203434 | ENA

Zootermopsis nevadensis nuttingi

Project description:Zootermopsis nevadensis methylome sequencing

| PRJNA309979 | ENA

Zootermopsis nevadensis

Project description:Zootermopsis nevadensis Genome sequencing and assembly

| PRJNA203242 | ENA

Zootermopsis nevadensis nevadensis

Project description:Comprehensive expression analysis during caste differentiation in termite

| PRJDB6415 | ENA

Zootermopsis nevadensis

Project description:Transcriptome Sequencing in termites

| PRJDB7358 | ENA

Zootermopsis nevadensis

Project description:Transcriptome during soldier differentiation in termite

| PRJDB6671 | ENA

Artemisiospiza nevadensis

Project description:Artemisiospiza nevadensis

| PRJNA920067 | ENA

Melitaea nevadensis

Project description:Melitaea nevadensis overview

| PRJNA1182016 | ENA

Cyprinodon nevadensis

Project description:Cyprinodon nevadensis overview

| PRJNA949303 | ENA

The caste- and sex-specific DNA methylome of the termite Zootermopsis nevadensis.

Project description:Epigenetic inheritance plays an important role in mediating alternative phenotype in highly social species. In order to gain a greater understanding of epigenetic effects in societies, we investigated DNA methylation in the termite Zootermopsis nevadensis. Termites are the most ancient social insects, and developmentally distinct from highly-studied, hymenopteran social insects. We used replicated bisulfite-sequencing to investigate patterns of DNA methylation in both sexes and among castes of Z. nevadensis. We discovered that Z. nevadensis displayed some of the highest levels of DNA methylation found in insects. We also found strong differences in methylation between castes. Methylated genes tended to be uniformly and highly expressed demonstrating the antiquity of associations between intragenic methylation and gene expression. Differentially methylated genes were more likely to be alternatively spliced than not differentially methylated genes, and possessed considerable enrichment for development-associated functions. We further observed strong overrepresentation of multiple transcription factor binding sites and miRNA profiles associated with differential methylation, providing new insights into the possible function of DNA methylation. Overall, our results show that DNA methylation is widespread and associated with caste differences in termites. More generally, this study provides insights into the function of DNA methylation and the success of insect societies.

| S-EPMC5111047 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data