Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Slackia heliotrinireducens DSM 20476

ABSTRACT: Alkaloid-degrading bacterium

PROVIDER: PRJNA20831 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR017592.fastq.gz	Fastqsanger.gz
	SRR017593.fastq.gz	Fastqsanger.gz
	SRR072772.fastq.gz	Fastqsanger.gz
	SRR072773.fastq.gz	Fastqsanger.gz
	SRR090718.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Slackia heliotrinireducens

Project description:Rumen bacterium

| PRJNA60963 | ENA

Chitinophaga pinensis DSM 2588

Project description:Chitin-degrading bacterium

| PRJNA27951 | ENA

Aminobacterium colombiense DSM 12261

Project description:Amino acid degrading bacterium

| PRJNA32587 | ENA

Aminomonas paucivorans DSM 12260

Project description:Amino-acid degrading bacterium

| PRJNA33371 | ENA

Cellulomonas flavigena DSM 20109

Project description:Cellulose- and xylan-degrading bacterium

| PRJNA19707 | ENA

A global differential transcriptomic profiling of Mycobacterium gilvum PYR-GCK during pyrene and glucose metabolism, using RNA seq.

Project description:We report the differential expression of a PAH degrading bacterium in different states of substrate induction.

2013-02-22 | GSE44536 | GEO

Draft Genome Sequences of Type Strains of Gordonibacter faecihominis, Paraeggerthella hongkongensis, Parvibacter caecicola,Slackia equolifaciens, Slackia faecicanis, and Slackia isoflavoniconvertens.

Project description:Here, we report the annotated draft genome sequences of six type strains of the family Eggerthellaceae, Gordonibacter faecihominis JCM 16058, Paraeggerthella hongkongensis DSM 16106, Parvibacter caecicola DSM 22242, Slackia equolifaciens DSM 24851, Slackia faecicanis DSM 17537, and Slackia isoflavoniconvertens DSM 22006.

| S-EPMC6328674 | biostudies-literature

Rubrobacter xylanophilus DSM 9941

Project description:Thermophilic bacterium capable of degrading hemicellulose and xylan.

| PRJNA10670 | ENA

Transcriptome analysis of Arthrobacter in the phyllosphere

Project description:Arthrobacter chlorophenolicus A6 is a 4-chlorophenol degrading soil bacterium with high phyllosphere colonization capacity. Till now the genetic basis for the phyllosphere competency of Arthrobacter or other pollutant-degrading bacteria is uncertain. We investigated global gene expression profile of A. chlorophenolicus grown in the phyllosphere of common bean (Phaseolus vulgaris) compared to growth on agar surfaces.

2013-06-21 | GSE48198 | GEO

A global differential transcriptomic profiling of Mycobacterium gilvum PYR-GCK during pyrene and glucose metabolism, using RNA seq.

Project description:We report the differential expression of a PAH degrading bacterium in different states of substrate induction. Separate substrate cultivation of the same batch of bacterial isolates; total RNA extraction, processing and sequencing; gene expression analysis using bioinformatics softwares and experimental validation using qRT-PCR.

2013-02-22 | E-GEOD-44536 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data