Project description:Zymomonas mobilis ATCC 10988 is the type strain of the Z. mobilis subsp. mobilis taxon, members of which are some of the most rigorous ethanol-producing bacteria. Isolated from Agave cactus fermentations in Mexico, ATCC 10988 is one of the first Z. mobilis strains to be described and studied. Its robustness in sucrose-substrate fermentations, physiological characteristics, large number of plasmids, and overall genomic plasticity render this strain important to the study of the species. Here we report the finishing and annotation of the ATCC 10988 chromosomal and plasmid genome.

| S-EPMC3165638 | biostudies-literature

Transcriptomic analysis of ZMO_0422 in Zymomonas mobilis

Project description:Deletion of the IscR homolog ZMO_0422 was performed in Zymomonas mobilis to investigate the role of Fe-S cluster biogenesis in Zymomonas. Here we perform genome-wide transcirptomics study to examine transcript chagnes in delta-ZMO_0422 compared to WT Zymomonas mobilis under both aerobic and anaerobic growth conditions.

2025-11-20 | GSE304389 | GEO

Zymomonas mobilis oxidative stress transcriptomics

Project description:Zymomonas mobilis is an important bioenergy organism that has potential to produce biofuels, including ethanol, in high volumes. Here we examined the response of Zymomonas mobilis to various oxidative stresses using genome-scale transcriptomics data. We first examined the transcrpit abundance in WT aerobic growth compared to aerobic grown in paraquat, which forms superoxide. Under anaerobic growth conditions we compared WT Zymomonas mobilis with strains grown in media lacking iron as well as strains lacking iron that were treated with the iron chelator DIP before collection. Finally we examined transcript abundance in cells lacking ZMO_0422 (Rrf2 family transcription factor homolog) and ZMO_1411 (Fur homolog) grown under anaerobic conditions.

2025-11-20 | GSE304360 | GEO

Zymomonas mobilis subsp. pomaceae ATCC 29192

Project description:Zymomonas mobilis subsp. pomaceae ATCC 29192 Genome sequencing

| PRJNA208402 | ENA

Zymomonas mobilis subsp. mobilis

Project description:Zymomonas mobilis subsp. mobilis Genome sequencing

| PRJNA749177 | ENA

Transcriptome Profiling of Zymomonas mobilis Under ethanol stress

Project description:Investigation of the expression profiling of the ethanologenic Zymomonas mobilis in response to ethanol stress. A six chip study using total RNA recovered from three separate wild-type cultures of Zymomonas mobilis ATCC31821 and three separate cultures of a triple treated with 5% ethanol. Each chip measures the expression level of 1800 genes from Zymomonas mobilis ATCC31821 and the associated plasmids, with three-fold technical redundancy.

2013-12-31 | E-GEOD-39558 | biostudies-arrayexpress

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