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Panonychus citri

ABSTRACT: Comparative analysis of the small RNA transcriptome of four developmental stages of the Citrus red mite (Panonychus citri)

PROVIDER: PRJNA212522 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR940316.fastq.gz	Fastqsanger.gz
	SRR940317.fastq.gz	Fastqsanger.gz
	SRR940318.fastq.gz	Fastqsanger.gz
	SRR940319.fastq.gz	Fastqsanger.gz

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Comparative analysis of the small RNA transcriptome of four developmental stages of the Citrus red mite (Panonychus citri)

Project description:Total RNAs from the Citrus red mite at the embryo, larva, nymph and adult stages were used to construct small RNA libraries for Solexa sequencing. Several categories of sRNAs were identified, including 594 known microRNAs (miRNAs) grouped into 206 families and 31 novel miRNAs. In addition, according to bioinformatics analysis and S-Poly(T) miRNA assays, the expression level of many miRNAs varied among the developmental stages. Furthermore, the prediction of miRNAs target genes and their functional annotation indicated that miRNAs are involved in the regulation of multiple pathways in the Citrus red mite. The total RNAs from embryo, larva, nymph and adult stages of Panonychus citri were used to construct small RNA libraries for Solexa sequencing. The data from Solexa sequencer (Illumina) was compared to identify small RNAs in different stages of Panonychus citri.

2014-05-01 | E-GEOD-48985 | biostudies-arrayexpress

Molecular and genetic analysis of resistance to METI-I acaricides in Iranian populations of the citrus red mite Panonychus citri

Project description:The citrus red mite, Panonychus citri, is a major pest on citrus all around the world. Mitochondrial Electron Transport Inhibitors of complex I (METI-I) acaricides such as fenpyroximate have been used extensively to control P. citri populations, which resulted in multiple reports of METI-I resistant populations in the field. In this study, gene expression profile differences between METI-I resistant P. citri populations (Lahijan, Ramsar and Sari) and a susceptible P. citri population (Rasht) from Iran were compared using Illumina RNAseq.

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Comparative analysis of the small RNA transcriptome of four developmental stages of the Citrus red mite (Panonychus citri)

2014-05-01 | GSE48985 | GEO

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