Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Solanum lycopersicum strain:San Marzano

ABSTRACT: Solanum lycopersicum strain:San Marzano Genome sequencing

PROVIDER: PRJNA212546 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR941558_1.fastq.gz	Fastqsanger.gz
	SRR941558_2.fastq.gz	Fastqsanger.gz
	SRR941559_1.fastq.gz	Fastqsanger.gz
	SRR941559_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Solanum lycopersicum cultivar:Dwarf San Marzano

Project description:Solanum lycopersicum cultivar:Dwarf San Marzano Transcriptome or Gene expression

| PRJNA532377 | ENA

Solanum lycopersicum cultivar:Dwarf San Marzano

Project description:Solanum lycopersicum cultivar:Dwarf San Marzano Transcriptome or Gene expression

| PRJNA533559 | ENA

Solanum lycopersicum strain:M82 Transcriptome or Gene expression

Project description:We sequenced mRNA from immature green (15 days after anthesis) and red (Breaker+10 days) tomato (Solanum lycopersicum) fruit tissues from plants over-expressing SlGLK1 and SlGLK2 and from control plants 'M82' to compare gene expression levels between transgenic fruit and the control. Note: Samples in SRA were assigned the same sample accession. This is incorrect as there are different samples, hence “Source Name” was replaced with new values. Comment[ENA_SAMPLE] contains the original SRA sample accessions.

2013-06-01 | E-MTAB-4819 | biostudies-arrayexpress

microRNA-target RNA pairs revealed by Parallel analysis of RNA ends in Solanum lycopersicum

Project description:Solanum lycopersicum RNA degradome sequencing

2012-08-29 | GSE22236 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Solanum lycopersicum bud and flower Transcriptomes

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of Solanum lycopersicum bud and flower Transcriptomes

2021-02-27 | GSE164382 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Solanum lycopersicum Axillary bud Transcriptomes

Project description:RNA sequencing in tomato for detect mRNA expression of Solanum lycopersicum Axillary bud.The two cultivars (monomaker, raceme) at Axillary bud for transcriptome sequencing

2021-12-31 | GSE164164 | GEO

The Solanum lycopersicum WRKY3 Transcription Factor Regulates Salt Stress Tolerance In Tomato

Project description:The tomato SlWRKY3 transcription factor was overexpressed in cultivated tomato (Solanum lycopersicum)and transgenic plants transcriptome was compared to that of wild-type plants.

2016-03-15 | GSE74504 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Solanum lycopersicum Flower Transcriptomes

Project description:RNA sequencing in tomato for detect mRNA expression of Solanum lycopersicum flower.The two cultivars (monomaker, raceme) had three different flowering stages (budlet, Flower bud, Full bloom) for transcriptome sequencing

2021-08-11 | GSE163914 | GEO

Spectral library of Solanum lycopersicum for SWATH-MS

Project description:A spectral library was built for Solanum lycopersicum. The spectral library allows reproducible quantification for thousands of peptides per SWATH-MS analysis. Proteins from Solanum lycopersicum pericarp were digested with trypsin using in-gel digestion and the peptides were fractionated by high-pH reverse phase chromatography. HRM peptides were spiked into the peptides mixture and each fraction was injected on a Sciex TripleTOF 6600 mass spectrometer fitted with microflow set-up. The resulting .wiff files were analysed using MaxQuant and Spectronaut.

2017-05-11 | MSV000081074 | MassIVE

Solanum lycopersicum strain:TLB250

Project description:Solanum lycopersicum strain:TLB250 Genome sequencing

| PRJNA240809 | ENA