Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bartonella grahamii ATCC 700132

ABSTRACT: Bartonella grahamii ATCC 700132 Genome sequencing and assembly

PROVIDER: PRJNA225844 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	JACX01.dat.gz	Other
	JACX01.fasta.gz	Fasta.gz
	JACX01.master.dat	Other
	SRR1801742_1.fastq.gz	Fastqsanger.gz
	SRR1801742_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Bartonella grahamii

Project description:Bartonella grahamii Genome sequencing

| PRJNA1165127 | ENA

Comparative genomic hybridization of Bartonella grahamii strains from Sweden

Project description:Comparative genome hybridizations of 27 Bartonella grahamii strains from Sweden

2010-06-01 | E-TABM-850 | biostudies-arrayexpress

Comparative genomic hybridization of Bartonella grahamii global strains from Asia, Nothern Europe and America.

Project description:Comparative genome hybridizations of 26 global Bartonella grahamii strains

2010-06-01 | E-TABM-875 | biostudies-arrayexpress

Bartonella grahamii strain:AU4XJBT

Project description:Bartonella grahamii strain:AU4XJBT Genome sequencing and assembly

| PRJNA917834 | ENA

Comparative genomic hybridization of DNA from bacteriophages from Bartonella grahamii and cellular DNA

Project description:The DNA content of bacteriophages from Bartonella grahamii was investigated by hybridization against cellular DNA from the same organism. Phage particles were isolated from plate grown bacteria as well as from different growth phases during culture in liquid medium.

2009-07-04 | E-MEXP-2149 | biostudies-arrayexpress

Bartonella grahamii strain:OC92QH | isolate:OC92QH

Project description:Bartonella grahamii strain:OC92QH | isolate:OC92QH Genome sequencing

| PRJNA1080364 | ENA

Bartonella clarridgeiae ATCC 51734

Project description:Bartonella clarridgeiae ATCC 51734 Genome sequencing and assembly

| PRJNA223113 | ENA

Two novel Bartonella (sub)species isolated from edible dormice (Glis glis): Hints of cultivation stress-induced genomic changes

Project description:Bartonelloses are neglected emerging infectious diseases caused by facultatively intracellular bacteria transmitted between vertebrate hosts by various arthropod vectors. The highest diversity of Bartonella species has been identified in rodents. Within this study we focused on the edible dormouse (Glis glis), a rodent with unique life-history traits that often enters households and whose possible role in the epidemiology of Bartonella infections had been previously unknown. We identified and cultivated two distinct Bartonella sub(species) significantly diverging from previously described species, which were characterized using growth characteristics, biochemical tests, and various molecular techniques including also proteomics. Two novel (sub)species were described: Bartonella grahamii subsp. shimonis subsp. nov. and Bartonella gliris sp. nov.We sequenced two individual strains per each described (sub)species. During exploratory genomic analyses comparing two genotypes ultimately belonging to the same species, both factually and most importantly even spatiotemporally, we noticed unexpectedly significant structural variation between them. We found that most of the detected structural variants could be explained either by prophage excision or integration. Based on a detailed study of one such event, we argue that prophage deletion represents the most probable explanation of the observed phenomena.Moreover, in one strain of Bartonella grahamii subsp. shimonis subsp. nov. we identified a deletion related to Bartonella Adhesin A, a major pathogenicity factor that modulates bacteria-host interactions. Altogether, our results suggest that even a limited number of passages induced sufficient selective pressure to promote significant changes at the level of the genome.

2023-10-28 | PXD046060 | Pride

Bartonella elizabethae F9251 = ATCC 49927

Project description:Bartonella elizabethae F9251 = ATCC 49927 Genome sequencing and assembly

| PRJNA75203 | ENA

Bartonella rochalimae ATCC BAA-1498

Project description:Bartonella rochalimae ATCC BAA-1498 Genome sequencing and assembly

| PRJNA81693 | ENA