Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sponge metagenome

ABSTRACT: Red Sea marine sponge Stylissa carteri metatranscriptomes

PROVIDER: PRJNA229842 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1038495_1.fastq.gz	Fastqsanger.gz
	SRR1038495_2.fastq.gz	Fastqsanger.gz
	SRR1038496_1.fastq.gz	Fastqsanger.gz
	SRR1038496_2.fastq.gz	Fastqsanger.gz
	SRR1038497_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Red Sea marine sponge

Project description:Red Sea marine sponge Metagenome

| PRJNA935148 | ENA

sponge metagenome

Project description:Red Sea cold seep sponge Suberites sp. Metagenome

| PRJNA275362 | ENA

Transcriptomic profiles of the Mediterranean sponge species Aplysina aerophoba upon wounding by the specialist grazer Tylodina perversa

Project description:In the seabed, chemical defences mediate inter- and intraspecific interactions and may determine organisms’ success, shaping the diversity and function of benthic communities. Sponges represent a prominent example of chemically-defended marine organisms with great ecological success. The ecological factors controlling the production of their defensive compounds and the evolutionary forces that select for these defences remain little understood. Each sponge species produces a specific and diverse chemical arsenal with fish-deterrent, antifouling and antimicrobial properties. However, some small animals (mesograzers), mainly sea slugs, have specialized in living and feeding on sponges. Feeding on chemically-defended organisms provides a strategy to avoid predators, albeit the poor nutritional value of sponges. In order to investigate the mechanisms that control sponge chemical defence, with particular focus on the response to specialist grazers, we investigated the interaction between the sponge Aplysina aerophoba and the sea slug Tylodina perversa. Here we performed controlled experiments and collected sponge samples at different time points (3h, 1d and 6d after treatment). To further elucidate if the sponge response is specific to grazing by T. perversa, we also included a treatment in which sponges were mechanically damaged with a scalpel. We compared gene expression between treatments based on RNA-Seq data.

2022-01-30 | E-MTAB-8601 | biostudies-arrayexpress

sponge metagenome

Project description:Marine sponge Raw sequence reads

| PRJNA297126 | ENA

sponge metagenome

Project description:marine sponge Cinachyrella sp Metagenome

| PRJNA301178 | ENA

sponge metagenome

Project description:The sponge microbiome in deep-sea environment

| PRJNA552185 | ENA

sponge metagenome

Project description:Microorganisms Metagenome associated with marine sponge