Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Trichoderma reesei QM9414

ABSTRACT: Trichoderma reesei QM9414 Transcriptome or Gene expression

PROVIDER: PRJNA230357 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1045101.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

ArrayCGH of Trichoderma reesei strains QM9123, QM9414, NG14 and RutC-30

Project description:Trichoderma reesei is the main industrial producer of cellulases and hemicellulases used to depolymerize biomass in many biotechnical applications. Many production strains in use have been generated by classical mutagenesis. In this study we characterized genomic alterations in hyperproducing mutants of T. reesei by high-resolution comparative genomic hybridisation tiling array. We carried out aCGH analysis of four hyperproducing strains (QM9123, QM9414, NG14 and RutC-30) using QM6a genome as a reference. ArrayCGH analysis identified dozens of mutations in each strain analyzed.

2010-11-26 | GSE19606 | GEO

Expression analysis of Trichoderma reesei QM9414 and delta-phlp1, delta-gnb1 and delta-gng1 in light and darkness.

Project description:Investigation of whole genome gene expression level changes in response to different light conditions of the T. reesei QM9414 parental strain and the deletion strains delta-phlp1, delta-gnb1 and delta gng1, cultivated on 1 % microcrystalline cellulose. The mutants analyzed in this study are further described in Tisch et al. 2011: Carbohydrate degradation is significantly regulated by light and the phosducin like protein PhLP1 in Trichoderma reesei (Hypocrea jecorina). We used two biological replicates of four T. reesei strains (QM9414, delta-phlp1, delta-gnb1 and delta-gng1), cultivated in constant light (LL, 1800 lux) or constant darkness (DD) on microcrystalline cellulose.

2011-03-02 | E-GEOD-27581 | biostudies-arrayexpress

Expression analysis of Trichoderma reesei QM9414 and delta-phlp1, delta-gnb1 and delta-gng1 in light and darkness.

2011-03-02 | GSE27581 | GEO

Trichoderma reesei strain:QM 9414

Project description:Trichoderma reesei QM9414 Gene Expression Profiling - 31 transcriptome

| PRJNA442537 | ENA

Trichoderma reesei strain:QM 9414

Project description:Trichoderma reesei QM9414 Gene Expression Profiling - 91b transcriptome

| PRJNA442530 | ENA

Trichoderma reesei strain:QM 9414

Project description:Trichoderma reesei QM9414 Gene Expression Profiling - 2 transcriptome

| PRJNA442532 | ENA

Trichoderma reesei strain:QM 9414

Project description:Trichoderma reesei QM9414 Gene Expression Profiling - 4 transcriptome

| PRJNA442534 | ENA

Trichoderma reesei strain:QM 9414

Project description:Trichoderma reesei QM9414 Gene Expression Profiling - 3 transcriptome

| PRJNA442533 | ENA

Trichoderma reesei strain:QM 9414

Project description:Trichoderma reesei QM9414 Gene Expression Profiling - 5 transcriptome

| PRJNA442535 | ENA

Trichoderma reesei strain:QM 9414

Project description:Trichoderma reesei QM9414 Gene Expression Profiling - 6 transcriptome

| PRJNA442536 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data