Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sus scrofa strain:songliao black pigs

ABSTRACT: pig liver tissue transcriptome

PROVIDER: PRJNA234465 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1107730_1.fastq.gz	Fastqsanger.gz
	SRR1107730_2.fastq.gz	Fastqsanger.gz
	SRR1107727_1.fastq.gz	Fastqsanger.gz
	SRR1107727_2.fastq.gz	Fastqsanger.gz
	SRR1107728_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Sus scrofa strain:songliao black pigs

Project description:pig adipose Transcriptome with extreme backfat thickness

| PRJNA234335 | ENA

Sus scrofa strain:songliao black pigs

Project description:pigs liver Transcriptome or Gene expression

| PRJNA234464 | ENA

CGH analysis of DENA-induced liver tumor in pigs (Sus scrofa)

Project description:We have employed aCGH analysis of tumor tissue compared to non-tumourous tissue in pigs treated with diethylnitrosamine (DENA). Beside other liver tumors angiosarcoma-like tumors were observed in the DENA-treated livers.

2019-05-06 | GSE130720 | GEO

RNA-seq across 27 developmental stages in Sus scrofa skeletal muscle

Project description:To obtain an overview of the transcriptome landscape in developing pig skeletal muscle, 81 high-quality transcriptome libraries that covered 27 developmental stages (3 biological replicates per stage) in pig skeletal muscle were produced by strand-specific rRNA-depleted total RNA sequencing (RNA-seq). We generated 8.59 billion paired-end reads (150 bp × 2) covering 1.24 Tb of sequence for RNA-seq.

2020-09-01 | GSE157044 | GEO

Yawn contagion in domestic pigs (Sus scrofa).

Project description:Contrary to spontaneous yawning-an ancient phenomenon common to vertebrates-contagious yawning (elicited by others' yawns) has been found only in highly social species and may reflect an emotional inter-individual connection. We investigated yawn contagion in the domestic pig, Sus scrofa. Owing to the complex socio-emotional and cognitive abilities of Sus scrofa, we posited that yawn contagion could be present in this species (Prediction 1) and influenced by individual/social factors (Prediction 2). In June-November 2018, on 104 semi-free ranging adolescent/adult pigs, 224 videos were recorded for video analysis on yawning. Kinship information was refined via genetic analyses. Statistical elaboration was conducted via GLMMs and non-parametric/randomization/cross-tabulation tests. We found yawn contagion in Sus scrofa, as it was more likely that pigs yawned when perceiving rather than not perceiving (yawning/control condition) others' yawns (response peak in the first out of three minutes). Yawn contagion was more likely: (1) in response to males' yawns; (2) as the age increased; (3) within short distance (1 m); (4) between full siblings, with no significant association between kinship and distance. The influence of kinship suggests that-as also hypothesized for Homo sapiens-yawn contagion might be linked with emotional communication and possibly contagion.

| S-EPMC7817675 | biostudies-literature

DH06 Adrenal ACTH Sus scrofa

Project description:Large White and Meishan pigs were either non-treated or injected with mammalian 1-24 ACTH (Immediate Synachten, Novartis France) at the dose of 250 µg per animal. Pigs were sacrificed either immediately after capture from their home cage (non-treated animals) or 1 hour following ACTH injection. Adrenal glands were immediately collected from pigs and frozen on dry ice and then stored at -80°C until RNA isolation. Keywords: stress response, adrenal, gene expression, pig

2008-01-07 | GSE8377 | GEO

DH06 Adrenal ACTH Sus scrofa

Project description:Large White and Meishan pigs were either non-treated or injected with mammalian 1-24 ACTH (Immediate Synachten, Novartis France) at the dose of 250 Âµg per animal. Pigs were sacrificed either immediately after capture from their home cage (non-treated animals) or 1 hour following ACTH injection. Adrenal glands were immediately collected from pigs and frozen on dry ice and then stored at -80Â°C until RNA isolation. Keywords: stress response, adrenal, gene expression, pig 47 samples

2010-06-29 | E-GEOD-8377 | biostudies-arrayexpress

Sus scrofa

Project description:Gene expression profiling in Chinese mininature pig liver tissue following clenbuterol administration

| PRJNA110617 | ENA

Transcriptome data used for Sus scrofa gene annotation

Project description:To optimize the genome annotation, nine tissue and one pool RNA libraries (i.e. heart, liver, spleen, lung, kidney, muscle, fat, ovary, pool.) were constructed using the Illumina mRNA-spleeneq Prep Kit

2019-12-31 | GSE123858 | GEO

Sus scrofa

Project description:Psychosocial stress reflected by the liver transcriptome in the pig

| PRJNA215752 | ENA