Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cyriopagopus schmidti strain:Ornithoctonus

ABSTRACT: Ornithoctonus huwena Transcriptome

PROVIDER: PRJNA240354 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1185958.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Microdalyellia schmidti

Project description:Microdalyellia schmidti Transcriptome or Gene expression

| PRJNA275065 | ENA

Morphotypes and genetic diversity of Dendrobaena schmidti (Lumbricidae, Annelida).

Project description:Dendrobaena schmidti (Michaelsen, 1907) is a polymorphic earthworm species from the Caucasus and adjacent regions. Adult D. schmidti individuals have highly variable body size (from 1.5 to well over 10 cm) and color (from dark purple to total lack of pigmentation), so a lot of subspecies of D. schmidti have been described; however, the existence of most of them is currently under dispute. We studied the genetic diversity of D. schmidti from seven locations from the Western Caucasus using mitochondrial (a fragment of the cytochrome oxidase I gene) and nuclear (internal ribosomal transcribed spacer 2) DNA. For both genes studied, we found that our sample was split into two groups. The first group included somewhat bigger (3-7.5 cm) individuals that were only slightly pigmented or totally unpigmented (when fixed by ethanol). The second group contained small (1.7-3.5 cm) specimens with dark purple pigmentation. In one of the studied locations these two groups were found in sympatry. However, there were no absolute differences either in general appearance (pigmented/unpigmented, small/big) or among diagnostic characters. Although the two groups differed in size (the majority of individuals from the first group were 5-6 cm long, and of the second one, 2-3 cm), the studied samples overlapped to a certain degree. Pigmentation, despite apparent differences, was also unreliable, since it was heavily affected by fixation of the specimens. Thus, based on the obtained data we can conclude that D. schmidti consists of at least two species that have identical states of diagnostic characters, but differ in general appearance.

| S-EPMC7716558 | biostudies-literature

Coniophanes schmidti

Project description:Coniophanes schmidti

| PRJNA1205105 | ENA

Cyriopagopus schmidti

Project description:Haplopelma schmidti overview

| PRJNA241281 | ENA

Parahollardia schmidti

Project description:Parahollardia schmidti

| PRJNA1067086 | ENA

Cyriopagopus schmidti strain:Chinese earth tiger

Project description:Cyriopagopus schmidti strain:Chinese earth tiger Transcriptome or Gene expression

| PRJNA240542 | ENA

On a new Dictyna species (Araneae, Dictynidae) from the northern Palaearctic confused with the East Siberian D. schmidti Kulczynski, 1926.

Project description:A new species, Dictyna palmgrenisp. n., is described from Finland and Russia on the basis of both sexes. Most of the earlier records of Dictyna schmidti Kulczy?ski, 1926 from the northern Palaearctic refer to this new species. Dictyna shilenkovi Danilov, 2000, syn. n. from Cisbaikalia is synonymised with Dictyna schmidti. The general appearances and copulatory organs of Dictyna palmgrenisp. n., Dictyna schmidti and Dictyna major Menge, 1869 are illustrated. The distribution of Dictyna palmgrenisp. n. andDictyna schmidti is clarified. An unknown sac-like structure of the spermathecae of Dictyninae is briefly discussed.

| S-EPMC3208523 | biostudies-literature

Transcriptome of the NWMN_0641 deletion mutant strain and the wild-type Staphylococcus aureus Newman strain

Project description:To study the roles of NWMN_0641, we used microarray to compare the transcriptome of the NWMN_0641 deletion strain with that of the wild-type Staphylococcus aureus Newman strain. Transcriptome of the NWMN_0641 deletion mutant strain and the wild-type Newman strain

2014-11-04 | GSE57260 | GEO

Transcriptome analysis of the ΔYGP1 strain compared to its parental strain

Project description:We sought to understand the change in the global gene expression profile of the ΔYGP1 strain in comparison with the BGL-6_Kl parental strain. The transcriptome analysis revealed the change in expression of genes involved in cell wall structure, biogenesis, and integrity that might contribute to the improvement of the BGL display efficiency phenotype.

2021-05-01 | GSE173680 | GEO

comparative transcriptome analysis between original strain FS35 and FK520 high-yield strain OphaCfkbU

Project description:To solve the problem of low FK520 production by Streptomyces hygroscopicus var. ascomyceticus FS35, PHB synthesis gene phaC and PHB decomposition gene fkbU were co-overexpressed in parent strain FS35 to construct recombinant strain OphaCfkbU. Surprisingly, recombinant strain OphaCfkbU accumulated more biomass than parent strain FS35 in whole fermentation. Therefore, to explore the effect of co-overexpression on the strain growth, comparative transcriptome analysis were carried out between parent strain FS35 and recombinant strain OphaCfkbU. Transcriptome data showed that co-overexpression increased the utilization of sugar sources and stimulated the generation of coenzymes, ribosome, acyl carrier proteins and sulfate donors. This study revealed the internal mechanism of the effect of PHB on strain growth, proving a reference for the role of PHB in other microorganisms.

2021-03-23 | GSE143832 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data