Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fusarium temperatum strain:CMWF389

ABSTRACT: Fusarium temperatum strain:CMWF389 Genome sequencing and assembly

PROVIDER: PRJNA242703 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR18919701_1.fastq.gz	Fastqsanger.gz
	SRR18919701_2.fastq.gz	Fastqsanger.gz
	SRR18907655_1.fastq.gz	Fastqsanger.gz
	SRR18907655_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Fusarium temperatum

Project description:Fusarium temperatum overview

| PRJNA609374 | ENA

Fusarium temperatum strain:RC 2914

Project description:Fusarium temperatum strain:RC 2914 Genome sequencing and assembly

| PRJNA603941 | ENA

Molecular biodiversity in Fusarium subglutinans and F. temperatum

Project description:Fusarium subglutinans and F. temperatum

| PRJEB61306 | ENA

Mesorhizobium temperatum strain:SDW018

Project description:Mesorhizobium temperatum strain:SDW018 Genome sequencing and assembly

| PRJNA391225 | ENA

Keratitis by Fusarium temperatum, a novel opportunist.

Project description:BACKGROUND: Fusarium species are among the most common fungi present in the environment and some species have emerged as major opportunistic fungal infection in human. However, in immunocompromised hosts they can be virulent pathogens and can cause death. The pathogenesis of this infection relies on three factors: colonization, tissue damage, and immunosuppression. A novel Fusarium species is reported for the first time from keratitis in an agriculture worker who acquired the infection from plant material of maize. Maize plants are the natural host of this fungus where it causes stalk rot and seeding malformation under temperate and humid climatic conditions. The clinical manifestation, microbiological morphology, physiological features and molecular data are described. METHODS: Diagnosis was established by using polymerase chain reaction of fungal DNA followed by sequencing portions of translation elongation factor 1 alpha (TEF1 ?) and beta-tubulin (BT2) genes. Susceptibility profiles of this fungus were evaluated using CLSI broth microdilution method. RESULTS: The analyses of these two genes sequences support a novel opportunist with the designation Fusarium temperatum. Phylogenetic analyses showed that the reported clinical isolate was nested within the Fusarium fujikuroi species complex. Antifungal susceptibility testing demonstrated that the fungus had low MICs of micafungin (0.031 ?g/ml), posaconazole (0.25 ?g/ml) and amphotericin B (0.5 ?g/ml). CONCLUSION: The present case extends the significance of the genus Fusarium as agents of keratitis and underscores the utility of molecular verification of these emerging fungi in the human host.

| S-EPMC4234859 | biostudies-literature

Gene expression during priming-induced resistance to fusarium head blight in wheat as revealed by two distinct mutants of Fusarium graminearum

Project description:Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes) and developing seeds. This study compare the gene expression profile in wheat spikelets (spk 2) inoculated with either water (mock treatment) or a pathogenic strain of Fusarium graminearum (WT); spikelets 2 were inoculated 24 hrs after a neighbour spikelet (spk 0) was treated with either water or F. graminerum mutant strain Tri6Δ or NoxABΔ. Spikelets 2 were sampled 8 and 24 hrs after the second treatment.

2015-05-28 | GSE55653 | GEO

Fusarium verticillioides strain:FN

Project description:Fusarium verticillioides strain:FN Genome sequencing and assembly

| PRJNA811754 | ENA

Fusarium solani strain:SB1

Project description:Fusarium solani strain:SB1 Genome sequencing and assembly

| PRJNA819387 | ENA

Fusarium fujikuroi strain:FUS01

Project description:Fusarium fujikuroi strain:FUS01 Genome sequencing and assembly

| PRJNA381958 | ENA

Fusarium asiaticum strain:SR7

Project description:Fusarium asiaticum strain:SR7 Genome sequencing and assembly