Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Yersinia ruckeri ATCC 29473

ABSTRACT: Yersinia ruckeri ATCC 29473 Genome sequencing and assembly

PROVIDER: PRJNA243513 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR2177846.fastq.gz	Fastqsanger.gz
	SRR2177847.fastq.gz	Fastqsanger.gz
	SRR2177847_1.fastq.gz	Fastqsanger.gz
	SRR2177847_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

YerA41, a Yersinia ruckeri bacteriophage: determination of non-sequencable bacteriophage genome and investigation of bacterial response to infection.

Project description:YerA41 is a myoviridae bacteriophage that was originally isolated due its ability to infect Yersinia ruckeri bacteria, the causative agent of enteric redmouth disease of salmonid fish. Several attempts to determine its genomic DNA sequence using traditional and next generation sequencing technologies failed, indicating that the phage genome is modified such way that it is an unsuitable template for PCR amplification and sequencing. To determine the YerA41 genome sequence we isolated RNA from phage-infected Y. ruckeri cells at different time points post-infection, and sequenced it. The host-genome specific reads were substracted and de novo assembly was performed on the unaligned reads.

2020-03-04 | GSE146319 | GEO

Yersinia ruckeri

Project description:Yersinia ruckeri (Genome sequencing and assembly)

| PRJNA1008555 | ENA

Yersinia ruckeri

Project description:Yersinia ruckeri Genome sequencing and assembly

| PRJNA1007872 | ENA

Yersinia ruckeri

Project description:Yersinia ruckeri Genome sequencing and assembly

| PRJNA310959 | ENA

Yersinia ruckeri

Project description:Yersinia ruckeri