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Cannabis sativa

ABSTRACT: Whole genome-wide expression profiles of hemp (Cannabis sativa L.) in response to drought stress

PROVIDER: PRJNA245084 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR1258320_1.fastq.gz	Fastqsanger.gz
	SRR1258320_2.fastq.gz	Fastqsanger.gz
	SRR1258317_1.fastq.gz	Fastqsanger.gz
	SRR1258317_2.fastq.gz	Fastqsanger.gz
	SRR1258318_1.fastq.gz	Fastqsanger.gz

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Whole genome-wide expression profiles of hemp (Cannabis sativa L.) in response to drought stress

Project description:Drought stress is the main environmental factor influencing hemp growth and yield. However, little is known about the response mechanism of hemp to drought stress. A total of 44.10 M tags and 8.91G bases were sequenced in the control hemp (CK) and drought stress hemp (DS) libraries. A total of 1292 differentially expressed genes (DEGs), including 883 up-regulated genes and 409 down-regulated genes, were identified. These results may contribute toward improving our understanding about the drought stress regulatory mechanism of hemp, and improving its drought tolerance ability.

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Project description:Cannabis sativa L., which has been reclassified as an agronomic crop, has experienced an increase in cultivation. Its interactions with a variety of environmental stressors have been extensively studied. However, the mechanisms of recovery through fungal associations remain underexplored. Trichoderma hamatum, known for its role as a biological agent, enhances plant growth and provides antagonistic defense against pathogenic microbes. This meta-dataset aims to investigate whether Th can enhance drought resistance in a Cannabis plants.

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Project description:Even if a large amount of high-throughput functional genomic data exists, most researchers feature a strong background in molecular biology but lack advanced bioinformatics skills. In this work, publicly available gene expression datasets have been analyzed giving rise to a total of 40,224 gene expression profiles within different Cannabis tissues/developmental stages. The resource here proposed will provide researchers with a starting point for future investigations of Cannabis sativa.

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