Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Human metagenome

ABSTRACT: Multiple 16S rRNA gene sequences from bacteria in human milk

PROVIDER: PRJNA246095 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1270690.fastq.gz	Fastqsanger.gz
	SRR1270700.fastq.gz	Fastqsanger.gz
	SRR1270710.fastq.gz	Fastqsanger.gz
	SRR1270691.fastq.gz	Fastqsanger.gz
	SRR1270701.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

human metagenome

Project description:16S rRNA sequences from human milk samples raw sequence reads

| PRJNA294305 | ENA

aquatic metagenome

Project description:Bacteria 16S rRNA sequences

| PRJNA658717 | ENA

milk metagenome

Project description:16S rRNA sequences of milk microbiota

| PRJNA608144 | ENA

Human milk microbiome

Project description:Human milk microbiome 16S rRNA gene amplicon Metagenome

| PRJNA542940 | ENA

Chronic Strongyloides stercoralis infection increases Ruminococcus torques group and alter microbiome proteome in ivermectin treatment

Project description:The impact of mono-chronic S. stercoralis infection on the gut microbiome and microbial activities in infected participants was explored. The 16S rRNA gene sequencing of a longitudinal study with 2 sets of human fecal was investigated. Set A, 42 samples were matched, and divided equally into positive (Pos) and negative (Neg) for S. stercoralis diagnoses. Set B, 20 samples of the same participant in before (Ss+PreT) and after (Ss+PostT) treatment was subjected for 16S rRNA sequences and LC-MS/MS to explore the effect of anti-helminthic treatment on microbiome proteomes.

2023-11-07 | PXD037975 | JPOST Repository

Project description:bacteria 16S rRNA gene sequences

| PRJNA513113 | ENA

coral metagenome

Project description:Stony coral associated bacteria 16S rRNA gene sequences

| PRJNA196815 | ENA

human gut metagenome

Project description:Human infant gut 16S rRNA V3 region sequences

| PRJNA360073 | ENA

metagenome

Project description:16S rRNA partial gene sequences in rice-associative bacteria

| PRJDB18695 | ENA

An Easy Operating Pathogen Microarray (EOPM) Platform for Rapid Screening of Vertebrate Pathogens

Project description:An Easy Operating Pathogen Microarray (EOPM) was designed to detect almost all known pathogens and related species based on their genomic sequences. For effective identification of pathogens from EOPM data, a statistical enrichment algorithm has been proposed and further implemented in a user-friendly interface. A microarray was designed with probes for vertebrate-infecting virus sequences in EMBL, 18S rRNA fungi and parasite sequences from EMBL, and 16S rRNA sequences of bacteria from RDP, synthesized on the Agilent platform. The array was tested using 2 color dyes on cultured microbes and on clinical samples from sick and healthy people, looking for differences in clinically ill people compared to a number of healthy "controls".

2013-07-01 | E-GEOD-45860 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data