Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Zea mays strain:PHN11

ABSTRACT: Zea mays strain:PHN11 Genome sequencing

PROVIDER: PRJNA251176 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR3715742_1.fastq.gz	Fastqsanger.gz
	SRR3715742_2.fastq.gz	Fastqsanger.gz
	SRR3715743_1.fastq.gz	Fastqsanger.gz
	SRR3715743_2.fastq.gz	Fastqsanger.gz
	SRR3715744_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Zea mays cultivar:PHN11

Project description:Zea mays PHN11 Exome Capture - PHN11.2

| PRJNA455914 | ENA

Zea mays cultivar:PHN11

Project description:Zea mays PHN11 Exome Capture - PHN11.3

| PRJNA455915 | ENA

Zea mays subsp. mays Transcriptome or Gene expression

Project description:Zea mays subsp. mays Transcriptome or Gene expression Atlas.

2012-09-13 | E-MTAB-4342 | biostudies-arrayexpress

Zea mays Epigenomics

Project description:RNA-directed DNA methylation (RdDM) in plants is a well-characterized example of RNA interference-related transcriptional gene silencing. To determine the relationships between RdDM and heterochromatin in the repeat-rich maize (Zea mays) genome, we performed whole-genome analyses of several heterochromatic features: dimethylation of lysine 9 and lysine 27 (H3K9me2 and H3K27me2), chromatin accessibility, DNA methylation, and small RNAs; we also analyzed two mutants that affect these processes, mediator of paramutation1 and zea methyltransferase2.

2014-12-05 | E-MTAB-4191 | biostudies-arrayexpress

Zea mays cultivar:PHN11-PHG47-071

Project description:Gene expression profiling of inbread Zea mays PHN11-PHG47-071 transcriptome

| PRJNA460179 | ENA

Whole transcriptome analysis of coding and non-coding RNAs associated with Spodoptera frugiperda feeding in Zea mays

Project description:We report the application of whole transcriptome sequencing technology for high-throughput profiling of coding and non-coding RNAs associated with Spodoptera frugiperda feeding in Zea mays. 4,366 mRNAs and 233 lncRNAs were differentially expressed during Spodoptera frugiperda feeding in Zea mays. Our data contribute to the understanding of the function of coding and non-coding RNAs in the regulation of plant-insect interactions.

2023-11-21 | GSE247976 | GEO

Zea mays Transcriptome or Gene expression

Project description:Maize (Zea mays) is an excellent cereal model for research on seed development because of its relatively large size for both embryo and endosperm. Despite the importance of seed in agriculture, the genome-wide transcriptome pattern throughout seed development has not been well characterized. Using high-throughput RNA sequencing, we developed a spatiotemporal transcriptome atlas of B73 maize seed development based on 53 samples from fertilization to maturity for embryo, endosperm, and whole seed tissues.

2014-08-09 | E-MTAB-4395 | biostudies-arrayexpress

Zea mays Transcriptome or Gene expression

Project description:ProVitamin A and Vitamin E biosynthesis in Zea mays.

2012-09-17 | E-MTAB-4290 | biostudies-arrayexpress

Zea mays Transcriptome or Gene expression

Project description:In this study RNA-sequencing was used to monitor gene expression changes in four tissues (meristematic zone, elongation zone, and cortex and stele of the mature zone) of maize (Zea mays L.) primary roots in response to water deficit to gain a better understanding of the mechanisms underlying drought tolerance.

2015-10-08 | E-MTAB-4297 | biostudies-arrayexpress

Zea mays under 24 h hypoxia - shotgun of soluble proteins

Project description:Maize (Zea mays L.) was hydroponically grown for 14 days and then stressed with hypoxia. Maize roots were sampled after 24 hours and analyzed by mass spectrometry.

2022-05-06 | PXD033386 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data