Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Human lung metagenome

ABSTRACT: Comparison of Bacterial Communities in Bronchoalveolar Lavage between a U.S. and Malawi Population.

PROVIDER: PRJNA253931 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1501300.fastq.gz	Fastqsanger.gz
	SRR1501320.fastq.gz	Fastqsanger.gz
	SRR1501330.fastq.gz	Fastqsanger.gz
	SRR1501340.fastq.gz	Fastqsanger.gz
	SRR1503990.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 65

Similar Datasets

human lung metagenome

Project description:Metagenomic data of Bacterial 16SrRNA in Bronchoalveolar Lavage Patients Suspected Tuberculosis

| PRJDB18482 | ENA

Human Lung Transplant - BAL

Project description:Bronchoalveolar lavage samples collected from lung transplant recipients. Numeric portion of sample name is an arbitrary patient ID and AxBx number indicates the perivascular (A) and bronchiolar (B) scores from biopsies collected on the same day as the BAL fluid was collected. Several patients have more than one sample in this series and can be determined by patient number followed by a lower case letter. Acute rejection state is determined by the combined A and B score - specifically, a combined AB score of 2 or greater is considered an acute rejection. Keywords = Bronchoalveolar lavage Keywords = lung transplant Keywords: other

2004-11-30 | GSE2018 | GEO

Workflow for metaproteome characterization in bronchoalveolar lavage fluid (BALF)

Project description:Establish a pipeline for identifying bacterial peptides from human bronchoalveolar lavage fluid samples.

2019-06-24 | PXD008273 | Pride

lung metagenome

Project description:Bronchoalveolar Lavage Fluid of dogs - Microbiota exploration

| PRJNA368783 | ENA

Azithromycin effects on lung microbiome in COPD patient

Project description:Azithromycin (AZM) reduces pulmonary inflammation and exacerbations in chronic obstructive pulmonary disease patients with emphysema. The antimicrobial effects of AZM on the lung microbiome are not known and may contribute to its beneficial effects. Methods. Twenty smokers with emphysema were randomized to receive AZM 250 mg or placebo daily for 8 weeks. Bronchoalveolar lavage (BAL) was performed at baseline and after treatment. Measurements included: rDNA gene quantity and sequence. Results. Compared with placebo, AZM did not alter bacterial burden but reduced Î±-diversity, decreasing 11 low abundance taxa, none of which are classical pulmonary pathogens. Conclusions. AZM treatment the lung microbiome Randomized trial comparing azithromycin (AZM) treatment with placebo for eight weeks. Bronchoalveolar lavage (BAL) samples were obtained before and after treatment to explore the effects of AZM on microbiome, in the lower airways. 16S rRNA was quantified and sequenced (MiSeq) The amplicons from total 39 samples are barcoded and the barcode is provided in the metadata_complete.txt file.

2016-07-19 | E-GEOD-74396 | biostudies-arrayexpress

lung metagenome

Project description:metagenomic next-generation sequencing of bronchoalveolar lavage fluid

| PRJNA974201 | ENA

lung metagenome

Project description:Bronchoalveolar Lavage Fluid of dogs - antimicrobial effect on Microbiota

| PRJNA507075 | ENA

Transcriptional profile of M-NM-^TcalA and M-NM-^TcrzA Aspergillus fumigatus mutants during mammal infection

Project description:Aspergillus fumigatus mutant strains were collected from bronchoalveolar lavage fluids (BALFs) during acute mouse infection (4 and 12 hours). Transcriptional analysis were conducted by comparison of each mutant with the wild type strain (CEA17) in a dye swap experiment. Besides, we performed the transcriptional profile of akuB(KU80) mutant compared to CEA17 wild type strain. All the strains were recovered from bronchoalveolar lavage fluid from CD1 mice infected with 10e8 spores for 4 and 12 hours.

2012-12-02 | E-GEOD-27428 | biostudies-arrayexpress

human lung metagenome

Project description:Analysis of lung microbiota from the bronchoalveolar lavage fluid of patients with acute severe respiratory distress syndrome

| PRJDB10129 | ENA

Bronchoalveolar lavage of healthy human adults

Project description:Bronchoalveolar lavage of healthy human adults

| PRJNA637757 | ENA