Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Diplodia sapinea

ABSTRACT: Diplodia pinea overview

PROVIDER: PRJNA255819 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR32830885_1.fastq.gz	Fastqsanger.gz
	SRR32830885_2.fastq.gz	Fastqsanger.gz
	SRR32830886_1.fastq.gz	Fastqsanger.gz
	SRR32830886_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 22

Similar Datasets

Diplodia sapinea

Project description:Chromosome-level genome assemblies for the latent pine pathogen, Diplodia sapinea, reveal two rapidly evolving accessory chromosomes

| PRJNA1240814 | ENA

Diplodia sapinea strain:ZXD319

Project description:Diplodia sapinea strain:ZXD319 Genome sequencing

| PRJNA1222175 | ENA

Diplodia sapinea CMW 190

Project description:Diplodia sapinea CMW 190 Genome sequencing and assembly

| PRJNA215898 | ENA

Diplodia sapinea strain:CMW39103

Project description:Diplodia sapinea strain:CMW39103 Genome sequencing and assembly

| PRJNA242796 | ENA

Diplodia seriata

Project description:Diplodia seriata overview

| PRJNA350342 | ENA

IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis.

Project description:The draft nuclear genomes of Diplodia sapinea, Ceratocystis moniliformis s. str., and C. manginecans are presented. Diplodia sapinea is an important shoot-blight and canker pathogen of Pinus spp., C. moniliformis is a saprobe associated with wounds on a wide range of woody angiosperms and C. manginecans is a serious wilt pathogen of mango and Acacia mangium. The genome size of D. sapinea is estimated at 36.97 Mb and contains 13 020 predicted genes. Ceratocystis moniliformis includes 25.43 Mb and is predicted to encode at least 6 832 genes. This is smaller than that reported for the mango wilt pathogen C. manginecans which is 31.71 Mb and is predicted to encode at least 7 494 genes. The latter is thus more similar to C. fimbriata s.str., the type species of the genus. The genome sequences presented here provide an important resource to resolve issues pertaining to the taxonomy, biology and evolution of these fungi.

| S-EPMC4107891 | biostudies-literature

High quality Diplodia sapinea genome assemblies reveal potential Asian origin of the global conifer pathogen

Project description:Diplodia sapinea whole genome-based global phylogeny

| PRJEB80906 | ENA

Pinofuranoxins A and B, Bioactive Trisubstituted Furanones Produced by the Invasive Pathogen <i>Diplodia sapinea</i>.

Project description:Two new bioactive trisubstituted furanones, named pinofuranoxins A and B (1 and 2), were isolated from Diplodia sapinea, a worldwide conifer pathogen causing severe disease. Pinofuranoxins A and B were characterized essentially by NMR and HRESIMS spectra, and their relative and absolute configurations were assigned by NOESY experiments and computational analyses of electronic circular dichroism spectra. They induced necrotic lesions on Hedera helix L., Phaseolus vulgaris L., and Quercus ilex L. Compound 1 completely inhibited the growth of Athelia rolfsii and Phytophthora cambivora, while 2 showed antioomycetes activity against P. cambivora. In the Artemia salina assay both toxins showed activity inducing larval mortality.

| S-EPMC8477388 | biostudies-literature

Diplodia seriata isolate:DS831

Project description:Diplodia seriata isolate:DS831 Genome sequencing and assembly

| PRJNA261773 | ENA

Diplodia seriata strain:F98.1

Project description:Diplodia seriata strain:F98.1 Genome sequencing and assembly

| PRJNA350273 | ENA