Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Amia calva

ABSTRACT: Amia calva Transcriptome

PROVIDER: PRJNA255850 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14562176.fastq.gz	Fastqsanger.gz
	SRR14562177.fastq.gz	Fastqsanger.gz
	SRR14562178.fastq.gz	Fastqsanger.gz
	SRR14562179.fastq.gz	Fastqsanger.gz
	SRR14562180.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

Amia calva

Project description:Amia calva overview

| PRJNA291112 | ENA

Amia calva

Project description:Amia calva developmental genomics

| PRJNA659268 | ENA

Amia calva isolate:fAmiCal2

Project description:Amia calva (bowfin) genome, fAmiCal2, haplotype 2

| PRJNA1070664 | ENA

Amia calva isolate:fAmiCal2

Project description:Amia calva (bowfin) genome, fAmiCal2, haplotype 1

| PRJNA1070663 | ENA

Amia calva isolate:single male individual (Calvin)

Project description:Amia calva isolate:single male individual (Calvin) Genome sequencing and assembly

| PRJNA417081 | ENA

Project description:Amia calva rad-seq data

| PRJNA875639 | ENA

Project description:Amia calva (bowfin) genome, fAmiCal2

| PRJNA1072716 | ENA

Phylogenomic analysis of the bowfin (Amia calva) reveals unrecognized species diversity in a living fossil lineage

Project description:The Bowfin (Amia calva), as currently recognized, represents the sole living member of the family Amiidae, which dates back to approximately 150 Ma. Prior to 1896, 13 species of extant Bowfins had been described, but these were all placed into a single species with no rationale or analysis given. This situation has persisted until the present day, with little attention given to re-evaluation of those previously described nominal forms. Here, we present a phylogenomic analysis based on over 21,000 single nucleotide polymorphisms (SNPs) from 94 individuals that unambiguously demonstrates the presence of at least two independent evolutionary lineages within extant Amia populations that merit species-level standing, as well as the possibility of two more. These findings not only expand the recognizable species diversity in an iconic, ancient lineage, but also demonstrate the utility of such methods in addressing previously intractable questions of molecular systematics and phylogeography in slowly evolving groups of ancient fishes.

| S-EPMC9529906 | biostudies-literature

Project description:Transcriptome sequencing of bowfin (Amia calva) immune-related tissues

| PRJNA612482 | ENA

Project description:Amia calva (bowfin) genome, fAmiCal2, sequence data

| PRJNA1139350 | ENA