Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Candidatus Atelocyanobacterium thalassa isolate SIO64986

ABSTRACT: Candidatus Atelocyanobacterium thalassa isolate SIO64986 Genome sequencing and assembly

PROVIDER: PRJNA256120 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	JPSP01.dat.gz	Other
	JPSP01.fasta.gz	Fasta.gz
	JPSP01.master.dat	Other
	JPSP01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

Candidatus Atelocyanobacterium thalassa isolate ALOHA

Project description:Candidatus Atelocyanobacterium thalassa isolate ALOHA Genome sequencing

| PRJNA30917 | ENA

Candidatus Atelocyanobacterium thalassa

Project description:Candidatus Atelocyanobacterium thalassa overview

| PRJNA236537 | ENA

Candidatus Atelocyanobacterium thalassa

Project description:Transcriptional cycle suited to daytime N2 fixation in the unicellular cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A)

| PRJNA390762 | ENA

Thalassa montezumae isolate:CaicosLana

Project description:Thalassa montezumae isolate:CaicosLana Genome sequencing and assembly

| PRJNA1083940 | ENA

Diel gene expression analysis of Trichodesmium erythraeum IMS101 in light and dark cycle

Project description:Investigation of whole genome gene expression level changes in Trichodesmium erythraeum IMS101 during a 24-hr light and dark cycle. The diel gene expression analyzed in this study is further described in Muñoz-Marin, M., I. N. Shilova, T. Shi, H. Farnelid & J. P. Zehr. 2019. The transcriptional cycle is suited to daytime N2 fixation in the unicellular cyanobacterium “Candidatus Atelocyanobacterium thalassa” (UCYN-A). mBio 10:e02495-18. https://doi.org/10.1128/mBio.02495-18.

2017-06-11 | GSE99896 | GEO

Transcriptional cycle suited to daytime N2 fixation in the unicellular cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A)

Project description:Investigation of whole genome gene expression level changes in two strains of the cyanobacteria Atelocyanobacterium thalasaa (UCYN-A) from environmental samples. The diel gene expression analyzed in this study is further described in Muñoz-Marin, M., I. N. Shilova, T. Shi, H. Farnelid & J. P. Zehr. 2017. Unicellular cyanobacterial symbiosis facilitates aerobic nitrogen fixation. Science (to be submitted).

2018-12-05 | GSE100124 | GEO

Open ocean and coastal strains of the N2-fixing cyanobacterium UCYN-A have distinct transcriptomes

Project description:Although N2 fixation can occur in free-living cyanobacteria, the unicellular endosymbiotic cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) is considered to be a dominant N2-fixing species in marine ecosystems. Four UCYN-A sublineages are known from partial nitrogenase (nifH) gene sequences. However, few studies have investigated their habitat preferences and regulation by their respective hosts in open-ocean versus coastal environments. Here, we compared UCYN-A transcriptomes from oligotrophic open-ocean versus nutrient-rich coastal waters. UCYN-A1 metabolism was more impacted by habitat changes than UCYN-A2. However, across habitats and sublineages genes for nitrogen fixation and energy production were highly transcribed. Curiously these genes, critical to the symbiosis for the exchange of fixed nitrogen for fixed carbon, maintained the same schedule of diel expression across habitats and UCYN-A sublineages, including UCYN-A3 in the open-ocean transcriptomes. Our results undersore the importance of nitrogen fixation in UCYN-A symbioses across habitats, with consequences for community interaction and global biogeochemical cycles.

2023-02-23 | GSE206403 | GEO

Candidatus Phytoplasma mali isolate:Tabriz1

Project description:Candidatus Phytoplasma mali isolate:Tabriz1 Genome sequencing and assembly

| PRJNA804530 | ENA

Candidatus Methanohalarchaeum thermophilum isolate:HMET1

Project description:Candidatus Methanohalarchaeum thermophilum isolate:HMET1 Genome sequencing and assembly

| PRJNA357090 | ENA

Candidatus [Bacteroides] periocalifornicus isolate:12B

Project description:Candidatus [Bacteroides] periocalifornicus isolate:12B Genome sequencing and assembly

| PRJNA289925 | ENA