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Escherichia coli BW25113

ABSTRACT: Expression Profiling of E. coli K-12 BW25113 in Minimal Media with Glucose and Amino Acid Supplementations

PROVIDER: PRJNA256160 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR1525110_1.fastq.gz	Fastqsanger.gz
	SRR1525110_2.fastq.gz	Fastqsanger.gz
	SRR1525111_1.fastq.gz	Fastqsanger.gz
	SRR1525111_2.fastq.gz	Fastqsanger.gz
	SRR1525108_1.fastq.gz	Fastqsanger.gz

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Similar Datasets

Escherichia coli BW25113

Project description:Expression Profiling of E. coli K-12 BW25113 in Minimal Media with Different Carbon Sources

| PRJNA256161 | ENA

Expression Profiling of E. coli K-12 BW25113 in Minimal Media with Different Carbon Sources

Project description:mRNA sequencing was performed on E. coli K-12 BW25113 grown on Glucose, Pyruvate, Fumarate, and Acetate.

2017-02-14 | GSE59759 | GEO

Gene expression profile of an ldhA-pflB- double knockout strain of E. coli BW25113 relative to wild-type

Project description:Comparison of gene expression profile in E. coli BW25113 wild type and ldhA-pflB- double mutant growing microaerobically in M9 media containing 10 g/L Glucose

2010-05-26 | GSE21995 | GEO

Structural systems biology evaluation of metabolic thermotolerance in Escherichia coli

Project description:Investigation of whole genome gene expression level in E. coli K-12 MG1655 in glucose M9 minimal media with/without heatshock

2013-06-20 | GSE42675 | GEO

E. coli BW25113 ompA mutant vs wild type biofilm and E. coli BW25113 ompA/pCA24N_ompA vs ompA/pCA24N suspension cells

Project description:This Series involves two studies: 1) The gene expression of E. coli K-12 BW25113 ompA mutant strain vs. wild type strain glasswool biofilm cells and E. coli K-12 BW25113 ompA mutant vs. wild type polystyrene biofilm cells. 2) The gene expression of E. coli BW25113 ompA/pCA24N_ompA vs. ompA/pCA24N suspension cells.

2010-01-20 | GSE14064 | GEO

E. coli BW25113 proteomics in nutrient-rich and minimal medium

Project description:E. coli BW25113 growth in a nutrient-rich medium supplemented with 20 proteinogenic amino acid medium was studied and compared to growth in minimal medium. Proteome data from these experiments revealed significant differences in amino acid synthesis and transport proteins that were reduced in the nutrient-rich meidum. Changes in energy production and conversion proteins were also observed as in nutrient-rich conditions pyruvate dehydrogenase complex and acetate producing proteins increased, while the TCA cycle proteins decreased.

2020-02-18 | PXD011726 | Pride

BW25113 Rif pre-treated persister cells vs. stationary phase BW25113 wild-type

Project description:E. coli K-12 BW25113 persister cells generated via rifampicin pre-treatment relative to BW25113 wild-type stationary phase gene expression. Persister cells were generated following exposure to ampicillin 20 ug/mL.

2016-11-20 | GSE34177 | GEO

Escherichia coli transcriptome reorganization caused by nutritional changes

Project description:Escherichia coli K-12 BW25113 were cultured in the LB and M63 media. Exponetially growing populations were collected for RNAseq. The culture medium-induced transcriptional changes were analyzed.

2020-08-31 | GSE136101 | GEO

BW25113 H202 and delta rpoS persister cells vs. stationary phase BW25113 wild-type

Project description:E. coli K-12 BW25113 persister cells generated via H202 pre-treatment and deletion of rpoS, relative to BW25113 wild-type stationary phase gene expression. Persister cells were generated following exposure to ampicillin 20 ug/mL.

2012-04-03 | GSE34028 | GEO

Gene expression for Escherichia coli BW25113 exponential growth on minimal medium with eight different carbon sources: Glucose, Galactose, Glycerol, Gluconate, Fructose, Pyruvate, Succinate, Acetate.

Project description:This dataset contains the gene expression signature in triplicates of Escherichia coli BW25113 growing exponentially on eight different environments: minimal medium supplemented with 5 g/L of Glucose, Galactose, Glycerol, Gluconate, Fructose, Pyruvate, Succinate or Acetate as the sole carbon source.

2015-10-07 | E-MTAB-3392 | biostudies-arrayexpress

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