Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arundo donax

ABSTRACT: Arundo donax Transcriptome or Gene expression

PROVIDER: PRJNA256910 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1559299_1.fastq.gz	Fastqsanger.gz
	SRR1559299_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Arundo donax

Project description:Arundo donax chloroplast

| PRJNA1057318 | ENA

Arundo donax L. transcriptome under salt stress

Project description:Arundo donax L. is one of the most promising bioenergy crop due to its high biomass yield and low irrigation requirement. The resistance to biotic and abiotic stress causes the high invasiveness of this plant which can grow with very low management input (e.g., pesticides, fertilization, irrigation) even in marginal lands or in fields irrigated with waste or salty water. Despite its economic importance, the A. donax genomic resources are still limited. In particular, no information on its transcriptional response to salt stress is available.We report the leaf transcriptome sequencing, de novo assembly and annotation of a giant reed genotype under two levels of salt stress. The study will be useful for providing insight into the molecular mechanism underlying its extreme adaptability also offering a platform for directing future efforts towards the genetic improvement of this species.

2019-02-01 | GSE121552 | GEO

Transcriptomic genotype-dependent response of Arundo donax L. under salt stress.

Project description:Arundo donax L. is one of the most promising bioenergy crop due to its high biomass yield and low irrigation requirement. The resistance to biotic and abiotic stress causes the high invasiveness of this plant, which can grow with very low management input (e.g., pesticides, fertilization, irrigation) even in marginal lands or in fields irrigated with waste or salty water. We report the leaf transcriptome sequencing, de novo assembly and annotation of a giant reed G34 genotype under salt stress. This genotype shows a different transcriptomic response to salinity compared to other A. donax genotypes. This finding was unexpected considering that the genetic variability of this species is supposed to be low due to its vegetative reproductive process. This study aims to direct future efforts towards the A. donax genetic improvement.

2020-02-24 | GSE125104 | GEO

Arundo donax

Project description:Arundo donax genome sequencing project

| PRJNA32645 | ENA

Arundo donax

Project description:Arundo donax Raw sequence reads

| PRJNA360076 | ENA

Arundo donax cultivar:AD20

Project description:Arundo donax AD20 Transcriptome - 3J20F

| PRJNA710700 | ENA

Arundo donax cultivar:AD20

Project description:Arundo donax AD20 Transcriptome - 1M20F