Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli str. K-12 substr. MG1655

ABSTRACT: Expression Profiling E. Coli Evolved on Glucose Minimal Media

PROVIDER: PRJNA260785 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1573440_1.fastq.gz	Fastqsanger.gz
	SRR1573440_2.fastq.gz	Fastqsanger.gz
	SRR1573441.fastq.gz	Fastqsanger.gz
	SRR1573441_1.fastq.gz	Fastqsanger.gz
	SRR1573441_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 23

Similar Datasets

RNA-seq analysis of Escherichia coli str. K-12 substr. MG1655

Project description:Expression profiles of wild-type and SgrR mutant E. coli strains under aMG and 2-DG-induced stress. Expression profiles of E. coli overexpressing SgrS sRNA.

2013-03-26 | GSE45443 | GEO

RNA-seq analysis of Escherichia coli str. K-12 substr. MG1655

Project description:Expression profiles of wild-type and SgrR mutant E. coli strains under aMG and 2-DG-induced stress. Expression profiles of E. coli overexpressing SgrS sRNA. Illumina RNA-Seq of total RNA extracted from wild-type, SgrR/SgrS mutant and SgrS overexpressing E. coli strains grown in different conditions.

2013-03-26 | E-GEOD-45443 | biostudies-arrayexpress

YAMAT-seq of mature tRNA pools in the bacterium Escherichia coli str. K-12 substr. MG1655 and derivatives

Project description:Mature tRNA pools were measured using an adaptation of YAMAT-seq (Shigematsu et al., 2017; doi:10.1093/nar/gkx005 ) and further described in (Ayan et al., 2020; doi:10.7554/eLife.57947) in 10 strain-medium combinations (all strains dervied from the model bacterium E. coli MG1655). The aim of the experiment was to investigate the effect of reducing tRNA gene copy number on mature tRNA pools in rich and poor media.

2022-12-02 | GSE198606 | GEO

Escherichia coli str. K-12 substr. MG1655

Project description:Expression profiling of E. coli rpoS knock-out strain during stationary phase in M9 minimal media with 0.2% glucose

| PRJNA202222 | ENA

Evolution of Escherichia coli to 42 °C and Subsequent Genetic Engineering Reveals Adaptive Mechanisms and Novel Mutations

Project description:mRNA sequencing was performed on E. coli evolved at 42C on M9 Minimal Media with Glucose

2019-06-11 | GSE132442 | GEO

Escherichia coli str. K-12 substr. MG1655

Project description:Ribosome profiling of E. coli K-12 MG1655 MOPS rich media with 0.2% glucose

| PRJNA269272 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Transcriptome analysis of E. coli in M9 minimal media supplemented with propylene glycol or glycerol

| PRJNA151283 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Transcriptional expression level of E. coli at 37 ℃ in LB media

| PRJNA279273 | ENA

Expression Profiling E. Coli Evolved on Glucose Minimal Media

Project description:mRNA sequencing was performed on E. coli evolved at 37C on M9 Minimal Media with Glucose

2014-12-03 | GSE61327 | GEO

Escherichia coli str. K-12 substr. MG1655

Project description:Sequencing of E. coli FusAP610T lab populations evolved in sub-lethal concentrations of kanamycin (15 µg/ml)

| PRJNA325097 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data