Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cnidaria

ABSTRACT: Phylogenomic analysis of Cnidaria Transcriptome or Gene expression

PROVIDER: PRJNA263637 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1952730.fastq.gz	Fastqsanger.gz
	SRR1952740.fastq.gz	Fastqsanger.gz
	SRR1952731.fastq.gz	Fastqsanger.gz
	SRR1952741_1.fastq.gz	Fastqsanger.gz
	SRR1952741_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 19

Similar Datasets

Cnidaria

Project description:Cnidaria Raw sequence reads

| PRJNA945904 | ENA

Cnidaria sp. DR-2012

Project description:Cnidaria sp. DR-2012 Genome sequencing

| PRJNA174188 | ENA

ACME dissociation: a versatile cell fixation-dissociation method for single-cell transcriptomics

Project description:We performed single-cell transcriptome analysis (using 10x genomics 3' scRNA-seq v3.1 chemistry) in the sea anemone Nematostella vectensis (Cnidaria).

2021-04-01 | GSE166977 | GEO

Novel defensin-like sequences from endemic Australian Cnidaria

Project description:Novel defensin-like sequences found in endemic Australian Cnidaria transcriptomes

| PRJEB27894 | ENA

Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages

Project description:Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Calvadosia cruxmelitensis (Staurozoa) and Cassiopea xamachana (Scyphozoa)

| PRJEB23739 | ENA

TR study of ‘A multi-center proof-of-concept phase2 study of encorafenib + binimetinib + cetuximab in patients with BRAF non-V600E mutated metastatic colorectal cancer (BIGBANG study)&quot

Project description:Primary outcome(s): Cancer related genome analysis, gene expression and molecular characterization analysis

| 2647002 | ecrin-mdr-crc

Project description:Example analysis with automated phylogenomic tools. Transcriptome or Gene expression

| PRJNA205486 | ENA

Spore formation in a parasitic cnidarian: proteomic analysis of Ceratonova shasta (Cnidaria: Myxozoa)

Project description:Myxozoans are widely distributed aquatic obligate endoparasites that were recently recognized as belonging within the phylum Cnidaria. They have complex life cycles with waterborne transmission stages: resistant, infectious spores that are unique to myxozoans. However, little is known about the processes that give rise to these transmission stages. To understand the molecular underpinnings of spore formation, we conducted proteomics on Ceratonova shasta, a highly pathogenic myxozoan that causes severe mortalities in wild and hatchery-reared salmonid fishes. We compared proteomic profiles between developmental stages from inside the fish host, and the mature myxospore, which is released into the water where it drifts passively, ready to infect the next host. We found that C. shasta contains 2123 proteins; representing the first proteomic catalog of a myxozoan myxospore. Analysis of proteins differentially expressed between developing and mature spore stages uncovered processes that are active during spore formation. Our data highlight dynamic changes in the actin cytoskeleton, which provides myxozoan developmental stages with mobility through lamellipodia and filopodia, whereas in the mature myxospore the actin network supports F-actin stabilization that reinforces the transmission stage. These findings provide molecular insight into the myxozoan life cycle stages and, particularly, into the process of sporogenesis.

2021-04-06 | PXD022770 | Pride

Cnidaria

Project description:A collective resource for cnidarian genomic and transcriptomic data

| PRJNA507679 | ENA

Cnidaria

Project description:Cnidarian opsins and eye evolution

| PRJNA464357 | ENA