Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil metagenome

ABSTRACT: black soil in Northeast China Genome sequencing

PROVIDER: PRJNA264601 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1663491.fastq.gz	Fastqsanger.gz
	SRR1663492.fastq.gz	Fastqsanger.gz
	SRR1663425.fastq.gz	Fastqsanger.gz
	SRR1663427.fastq.gz	Fastqsanger.gz
	SRR1663489.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

A comprehensive study to understand the effects of soil type, soil transplant and landuse changes on soil microbial community and its feedback responses

Project description:The experiment at three long-term agricultural experimental stations (namely the N, M and S sites) across northeast to southeast China was setup and operated by the Institute of Soil Science, Chinese Academy of Sciences. This experiment belongs to an integrated project (The Soil Reciprocal Transplant Experiment, SRTE) which serves as a platform for a number of studies evaluating climate and cropping effects on soil microbial diversity and its agro-ecosystem functioning. Soil transplant serves as a proxy to simulate climate change in realistic climate regimes. Here, we assessed the effects of soil type, soil transplant and landuse changes on soil microbial communities, which are key drivers in Earth’s biogeochemical cycles.

2016-02-04 | GSE77546 | GEO

Project description:Black soil belt of northeast China

| PRJNA1101211 | ENA

soil metagenome

Project description:soil sample in Northeast China Raw sequence reads

| PRJNA427737 | ENA

Denitrifying community across black soil region of northeast China

Project description:Denitrifying community across black soil region of northeast China Raw sequence reads

| PRJNA719715 | ENA

soil metagenome

Project description:Haerbin black soil Genome sequencing

| PRJNA258150 | ENA

Project description:Bacillus communities across black soil zone of northeast China

| PRJNA525189 | ENA

Project description:Fungal community in black soil belt of northeast China

| PRJNA1103994 | ENA

A comprehensive study to understand the effects of climate warming, simulated by soil transplant, on soil microbial community and its feedback responses

Project description:Soil transplant serves as a proxy to simulate climate change in realistic climate regimes. Here, we assessed the effects of climate warming and cooling on soil microbial communities, which are key drivers in Earth’s biogeochemical cycles, four years after soil transplant over large transects from northern (N site) to central (NC site) and southern China (NS site) and vice versa. Four years after soil transplant, soil nitrogen components, microbial biomass, community phylogenetic and functional structures were altered. Microbial functional diversity, measured by a metagenomic tool named GeoChip, and phylogenetic diversity are increased with temperature, while microbial biomass were similar or decreased. Nevertheless, the effects of climate change was overridden by maize cropping, underscoring the need to disentangle them in research. Mantel tests and canonical correspondence analysis (CCA) demonstrated that vegetation, climatic factors (e.g., temperature and precipitation), soil nitrogen components and CO2 efflux were significantly correlated to the microbial community composition. Further investigation unveiled strong correlations between carbon cycling genes and CO2 efflux in bare soil but not cropped soil, and between nitrogen cycling genes and nitrification, which provides mechanistic understanding of these microbe-mediated processes and empowers an interesting possibility of incorporating bacterial gene abundance in greenhouse gas emission modeling.

2013-10-30 | GSE51592 | GEO

Project description:Microbial sampling in the black soil area of Northeast China

| PRJNA1125202 | ENA

soil metagenome

Project description:Paddy soil in china Genome sequencing

| PRJNA264450 | ENA