Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Propionibacterium freudenreichii subsp. freudenreichii strain:DSM 20271

ABSTRACT: Propionibacterium freudenreichii subsp. freudenreichii strain:DSM 20271 Genome sequencing

PROVIDER: PRJNA269789 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	GCA_000940845.1_sequence_report.txt	Txt

Items per page:

1 - 1 of 1

Similar Datasets

1,2-Propanediol utilization mediated by bacterial microcompartments in Propionibacterium freudenreichii DSM 20271

Project description:This study was conducted to investigate whether 1,2-propanediol could be metabolized by Propionibacterium freudenreichii DSM 20271 through bacterial microcompartment mediated metabolism.

2021-03-18 | PXD024700 | Pride

Propionibacterium freudenreichii subsp. shermanii strain:JS

Project description:Propionibacterium freudenreichii subsp. shermanii

| PRJNA317284 | ENA

Propionibacterium freudenreichii subsp. freudenreichii NBRC 12424

Project description:Propionibacterium freudenreichii subsp. freudenreichii NBRC 12424 genome sequencing project

| PRJDB365 | ENA

Propionibacterium freudenreichii ssp. shermanii JS genome annotation project

Project description:Propionibacterium freudenreichii is an important starter culture used in the manufacture of Swiss-type cheeses. We have generated the complete genome sequence of a Propionibacterium freudenreichii ssp. shermanii strain JS at the Institute of Biotechnology, University of Helsinki, by using a combination of pyrosequencing with GS FLX and GS FLX Titanium series reagents (Roche) and SOLiD 4 (Life Technologies), ABI 3130xl Genetic Analyzer (Life Technologies), and PacBio RS II (Pacific Biosciences) instruments. Initial genome annotation was carried out using RAST, and additional functional annotation information for each CDS was obtained from BLANNOTATOR, CDD, and KAAS. Accession number for genome sequence is PRJEB12148. This submission is for the transcriptome analysis of Propionibakcterium freudenreichii in cheese ripening under warm and cold conditions. The RNA reads were mapped to the reference genome PRJEB12148.

2016-04-14 | E-MTAB-4593 | biostudies-arrayexpress

Propionibacterium freudenreichii

Project description:Propionibacterium freudenreichii overview

| PRJNA35885 | ENA

Transcriptomic response of 6 Propionibacterium freudenreichii strains during cold storage

Project description:Propionibacterium freudenreichii is used as a ripening culture in Swiss cheese manufacture. It produces flavor compounds over the whole ripening period. During cheese ripening, P. freudenreichii is exposed to a temperature downshift, especially when cheeses are transferred from warm temperature (about 24°C) to cold temperature (about 4°C). The cold adaptation of the type strain was studied previously. The aim of this study was to investigate the adaptation of 6 other P. freudenreichii strains at cold temperature by means of a global gene expression profile. The temporal transcriptomic response of 6 P. freudenreichii strains was analyzed at 2 times of growth, during growth at 30°C then after 3 days 4°C, in the constant presence of lactate as the main carbon source.

2012-07-06 | GSE34227 | GEO

Propionibacterium freudenreichii subsp. shermanii SANPR8

Project description:Propionibacterium freudenreichii subsp. shermanii SANPR8 Genome sequencing

| PRJNA233692 | ENA

Propionibacterium freudenreichii wild-type CIRM-BIA 129 and CB129∆slpB mutant strains

Project description:Comparison of proteome expression of Propionibacterium freudenreichii wild-type strain and a mutant SlpB protein strain

2018-09-10 | PXD009804 | Pride

Transcriptome profiling of Propionibacterium freudenreichii strains associated with different anti-inflammatory properties.

Project description:Propionibacterium freudenreichii, a dairy starter, reaches a population close to 10^9 propionibacteria per gram of Swiss-type cheese at the time of consumption. Also consumed as a probiotic, it revealed strain-dependent anti-inflammatory properties mediated by proteins inducing IL-10 in leukocytes. Here, strains with varied anti-inflammatory potentials were compared in terms of transcriptome profiles.

2017-06-13 | GSE87574 | GEO

Ethylene glycol metabolism in Propionibacterium freudenreichii

Project description:This study was performed to monitor ethylene glycol metabolism by Propionibacterium freudenreichii and to elucidate the metabolic pathway involved.

2024-08-09 | PXD037369 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data