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Methanosarcina acetivorans C2A

ABSTRACT: High-throughput RNA sequencing of methanosarcina grown on methylated sulfur compounds

PROVIDER: PRJNA270832 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR1726190.fastq.gz	Fastqsanger.gz
	SRR1726191.fastq.gz	Fastqsanger.gz
	SRR1726192.fastq.gz	Fastqsanger.gz
	SRR1726183.fastq.gz	Fastqsanger.gz
	SRR1726193.fastq.gz	Fastqsanger.gz

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High-throughput RNA sequencing of methanosarcina grown on methylated sulfur compounds

Project description:Methylated sulfur compounds, including dimethylsulfide (DMS), methylmercaptopropionic acid (MMPA) and methylsulfide (MeSH), are well-documented to play roles in global sulfur cycle and climate homeostasis, yet the molecular mechanisms of how they are metabolized by methanogens remain largely uncharacterized. Here, using high-throughtput sequencing of RNA (RNA-seq), we gained insight into how methanogens respond to methylated sulfur compounds at the transcriptional level. The mRNA from wild-type of Methanosarcina acetivorans C2A grown on methylated sulfur compounds were harvested, sequenced and mapped to the genome. Then, we compared RNA-seq profiles to that grown on MeOH in search of unque genes.

2015-02-18 | E-GEOD-64349 | biostudies-arrayexpress