Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mus musculus

ABSTRACT: Single cell time course of macrophages exposed to Salmonella enterica subsp. typhimurium

PROVIDER: PRJNA274277 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1784340_1.fastq.gz	Fastqsanger.gz
	SRR1784340_2.fastq.gz	Fastqsanger.gz
	SRR1784350_1.fastq.gz	Fastqsanger.gz
	SRR1784350_2.fastq.gz	Fastqsanger.gz
	SRR1784360_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 384

Similar Datasets

Interplay of Salmonella enterica sv. Typhimurium and Bifidobacterium infantis during co-infection of gut epithelial cells

Project description:The deposited microarray data were generated in a study that integrated the gene expression profiles and metabolic responses of Caco2 cells incubated with Bifidobacterium infantis subsp. infantis and Salmonella enterica subsp. enterica sv. Typhimurium. The aim of this study was to investigate the interaction of B. infantis, S. Typhimurium, and host cells (Caco2) in the course of infection to understand the molecular mechanics of probiotic-pathogen-host interactions.

2024-05-08 | GSE266880 | GEO

SL1344_heat_shock_42C_RNA

Project description:Gene expression in Salmonella enterica sv Typhimurium SL1344 after heat shock to 42C Keywords: time-course

2004-05-10 | GSE808 | GEO

SL1344_heat_shock_37C_RNA

Project description:Gene expression in Salmonella enterica sv Typhimurium SL1344 after heat shock to 37C Keywords: time-course

2004-05-10 | GSE807 | GEO

LT2_hydrogen_peroxide_2mM_RNA

Project description:Gene expression Salmonella enterica sv Typhimurium LT2 post treatment with 2mM hydrogen peroxide Keywords: time-course

2004-05-10 | GSE806 | GEO

LT2_hydrogen_peroxide_2mM_DNA

Project description:Gene content Salmonella enterica sv Typhimurium LT2 post treatment with 2mM hydrogen peroxide Keywords: time-course

2004-05-10 | GSE624 | GEO

FabR ChIP-chip on Salmonella enterica subsp. enterica serovar Typhimurium SL1344

Project description:FabR ChIP-chip on Salmonella enterica subsp. enterica serovar Typhimurium SL1344 using anti-Myc antibody against strain with chromosomally 9Myc-tagged FabR (IP samples) and wildtype strain (mock IP samples)

2014-12-31 | GSE52877 | GEO

DT104_hydrogen_peroxide_2mM_DNA

Project description:Gene content in Salmonella enterica sv Typhimurium DT104 after treatment with 2mM hydrogen peroxide Keywords: time-course

2004-05-10 | GSE813 | GEO

14028s_hydrogen_peroxide_2mM_DNA

Project description:Gene content in Salmonella enterica sv Typhimurium 14028s after treatment with 2mM hydrogen peroxide Keywords: time-course

2004-05-10 | GSE811 | GEO

14028s_hydrogen_peroxide_2mM_RNA

Project description:Gene expression in Salmonella enterica sv Typhimurium 14028s post treatment with 2mM hydrogen peroxide Keywords: time-course

2004-05-10 | GSE623 | GEO

Analysis of bacterial and macrophage transcripts in ISRE-positive and negative infected macrophages

Project description:To identify bacterial transcripts that may be associated with type I IFN production in Salmonella enterica subsp typhimurium (SL1344) infected macrophages we transformed macrophages with an ISRE-GFP reporter construct and sorted separate populations of GFP positive and GFP negative infected macrophages. We then did whole transcriptome profiling, collecting both host and bacterial transcripts, for differential expression analysis Analysis of ISRE positive, negative, and mixed populations at two time points (unexposed and 24hours) in duplicate (biological replicates). A sample consisting of Salmonella prior to infection was also included

2015-09-07 | E-GEOD-65531 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data