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Wuchereria bancrofti

ABSTRACT: Wuchereria bancrofti Genome sequencing and assembly

PROVIDER: PRJNA275548 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR1915692_1.fastq.gz	Fastqsanger.gz
	SRR1915692_2.fastq.gz	Fastqsanger.gz
	SRR1915594.fastq.gz	Fastqsanger.gz

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Brugia pahangi transcriptomics

Project description:Brugia pahangi is a parasitic nematode that is closely related to B. malayi and Wuchereria bancrofti. B. malayi and W. bancrofti are responsible for lymphatic filariasis, affecting around 120 million people in 73 countries worldwide.This project aims to undertake high-throughput sequencing of Brugia pahangi transcriptome. The objective is to use transcriptomics to support gene finding and to recognize genes expressed in given life stages.

2013-01-25 | E-ERAD-68 | biostudies-arrayexpress

Wuchereria bancrofti strain:NA

Project description:The nematode vector of lymphatic filariasis

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Population genomics of the filarial nematode parasite Wuchereria bancrofti from mosquitoes.

Project description:Wuchereria bancrofti is a parasitic nematode and the primary cause of lymphatic filariasis--a disease specific to humans. W. bancrofti currently infects over 90 million people throughout the tropics and has been acknowledged by the world health organization as a vulnerable parasite. Current research has focused primarily on the clinical manifestations of disease and little is known about the evolutionary history of W. bancrofti. To improve upon knowledge of the evolutionary history of W. bancrofti, we whole genome sequenced 13 W. bancrofti larvae. We circumvent many of the difficulties of multiple infections by sampling larvae directly from mosquitoes that were experimentally inoculated with infected blood. To begin, we used whole genome data to reconstruct the historical population size. Our results support a history of fluctuating population sizes that can be correlated with human migration and fluctuating mosquito abundances. Next, we reconstructed the putative pedigree of W. bancrofti worms within an infection using the kinship coefficient. We deduced that there are full-sib and half-sib relationships residing within the same larval cohort. Through combined analysis of the mitochondrial and nuclear genomes we concluded that this is likely a results of polyandrous mating, the first time reported for W. bancrofti. Lastly, we scanned the genomes for signatures of natural selection. Annotation of putative selected regions identified proteins that may have aided in a parasitic life style or may have evolved to protect against current drug treatments. We discuss our results in the greater context of understanding the biology of an animal with a unique life history and ecology.

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