Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Anopheles stephensi

ABSTRACT: Anopheles stephensi RNAseq

PROVIDER: PRJNA277477 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1851030_1.fastq.gz	Fastqsanger.gz
	SRR1851030_2.fastq.gz	Fastqsanger.gz
	SRR1851022_1.fastq.gz	Fastqsanger.gz
	SRR1851022_2.fastq.gz	Fastqsanger.gz
	SRR1851024_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Anopheles stephensi

Project description:Anopheles stephensi Metagenome

| PRJNA507513 | ENA

Anopheles stephensi

Project description:Anopheles stephensi Metagenome

| PRJNA379512 | ENA

Anopheles stephensi

Project description:Anopheles stephensi transcriptome project

| PRJDA33439 | ENA

Anopheles stephensi

Project description:Anopheles stephensi Genome sequencing

| PRJNA168255 | ENA

Anopheles stephensi

Project description:Anopheles stephensi improved assembly

| PRJNA473393 | ENA

Transcriptomic analysis of Anopheles stephensi salivary glands during Plasmodium berghei infection

Project description:RNA-seq of Anopheles stephensi salivary glands during Plasmodium berghei infection

2015-11-05 | E-MTAB-3964 | biostudies-arrayexpress

Gene trapping in the Asian malaria vector, Anopheles stephensi

Project description:A piggyBac transposon-based gene trap element was transformed into the Asian malaria vector, Anopheles stephensi, and remobilized using the jumpstarter approach using genetic crosses. Individuals that displayed a gene trap remobilization event were then photodocumented and their RNA and DNA complements were extracted. The DNA compelement was used to determine the genomic insertion site, while the RNA was used to determine the transcript coverage of the genes into which the transposons inserted. In nearly half of the cases, insertion was identified to fall within introns present in the 5'-UTR of transcripts- which are not indicated in the current ab initio models for Anopheles stephensi. The ability to utilize next generation RNA-Seq elucidated the functionality of the gene trap elements that inserted outside of the ab initio gene models, providing clear evidence that not only was the gene trap element working properly, but that it also had a bias towards 5'-end insertion, in particular, 5'-UTR intronic insertion.

2016-03-01 | GSE78771 | GEO

Anopheles stephensi

Project description:Anopheles stephensi Raw sequence reads

| PRJNA639416 | ENA

Anopheles stephensi

Project description:Anopheles stephensi Raw sequence reads

| PRJNA513950 | ENA

Anopheles stephensi

Project description:Anopheles stephensi Raw sequence reads

| PRJNA379516 | ENA