Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sphingomonas endophytica strain:NS334

ABSTRACT: Sphingomonas endophytica Genome Sequencing

PROVIDER: PRJNA278221 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Sphingomonas endophytica

Project description:Sphingomonas endophytica overview

| PRJNA547384 | ENA

Sphingomonas endophytica strain:AS3.13

Project description:Sphingomonas endophytica AS3.13 genome sequencing

| PRJNA566959 | ENA

Sphingomonas endophytica strain:DSM 101535 | isolate:DSM 101535

Project description:Sphingomonas endophytica DSM 101535 genome sequencing

| PRJNA546798 | ENA

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed.

2014-11-01 | GSE62901 | GEO

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed. A two chip study using total RNA recovered from wild-type and motile strains of Sphingomonas. sp A1 grown in 0.5% alginate medium.

2014-11-01 | E-GEOD-62901 | biostudies-arrayexpress

Filimonas endophytica strain:3197

Project description:Filimonas endophytica 3197 genome sequencing

| PRJNA547156 | ENA

Comamonas endophytica strain:5MLIR

Project description:Comamonas endophytica strain:5MLIR Genome sequencing

| PRJNA842168 | ENA

Martelella endophytica strain:YC6887

Project description:Martelella endophytica strain:YC6887 Genome sequencing

| PRJNA272964 | ENA

Organic Nitrogen Source is Critical for Welan Production in Sphingomonas sp. ATCC 31555

Project description:Welan gum is mainly produced by Sphingomonas sp. ATCC 31555 and has broad applications in industry such as that in cement production. Both carbon and nitrogen sources are essential for welan production. However, how nitrogen sources affect the metabolism and gene transcription of welan remains elusive. Here, we used next-generation sequencing RNA-seq to analyze the transcriptome of Sphingomonas sp. ATCC 31555 in the presence of inorganic or organic nitrogen sources. Enriched gene expression and pathway analysis suggest that organic nitrogen sources significantly enhanced the expression of genes in central metabolic pathways of Sphingomonas sp. ATCC 31555 and those critical for welan synthesis compared to that observed using inorganic nitrogen sources. The present study improves our understanding of the molecular mechanism underlying the use of nitrogen in welan synthesis in Sphingomonas sp., as well as provides an important transcriptome resource for Sphingomonas sp. in relation to nitrogen sources.

2016-03-25 | GSE79497 | GEO

Actinorugispora endophytica strain:DSM 46770

Project description:Actinorugispora endophytica DSM 46770 genome sequencing

| PRJNA519302 | ENA