Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Staphylococcus aureus subsp. aureus DSM 20231

ABSTRACT: Staphylococcus aureus subsp. aureus DSM 20231 Genome sequencing

PROVIDER: PRJNA283471 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Staphylococcus aureus subsp. aureus DSM 20231

Project description:Staphylococcus aureus subsp. aureus DSM 20231 Genome sequencing and assembly

| PRJNA177203 | ENA

Staphylococcus aureus subsp. aureus

Project description:Staphylococcus aureus subsp. aureus Genome sequencing

| PRJNA683218 | ENA

Transcriptome analysis of collagen-adhered S. gallolyticus subsp. gallolyticus [DSM 16831]

Project description:Streptococcus gallolyticus subsp. gallolyticus is a commensal of the human gastrointestinal tract and a pathogen of infective endocarditis and other biofilm-associated infections with exposed collagen. Therefore, this study focuses on the characterization of the biofilm formation and collagen adhesion of S. gallolyticus subsp. gallolyticus under different conditions. It has been observed that lysozyme triggers biofilm formation divergently in the analyzed S. gallolyticus subsp. gallolyticus strains. The transcriptome analysis was performed for two strains which form more biofilm in the presence of lysozyme. Lysozyme leads to higher expression of genes of transcription and translation, of the dlt operon (cell wall modification), of hydrogen peroxide resistance proteins and of two immunity proteins which could be involved in biofilm formation. Furthermore, the adhesion ability of 73 different S. gallolyticus subsp. gallolyticus strains to collagen type I and IV was analyzed. High adhesion ability was observed for the strain UCN 34, whereas the strain DSM 16831 adhered only marginally to collagen. The full genome microarray analysis revealed strain-dependent gene expression due to adhesion. The expression of genes of a transposon and a phage region in strain DSM 16831 were increased, which corresponds to lateral gene transfer. Adherence to collagen leads to a change in the expression of genes of nutrients uptake in the strain UCN 34.

2017-05-17 | GSE98953 | GEO

Staphylococcus aureus subsp. aureus

Project description:Staphylococcus aureus subsp. aureus Genome sequencing and assembly

| PRJNA633996 | ENA

Staphylococcus aureus subsp. aureus 21194

Project description:Staphylococcus aureus subsp. aureus 21194 Genome sequencing

| PRJNA53607 | ENA

Staphylococcus aureus subsp. aureus 21201

Project description:Staphylococcus aureus subsp. aureus 21201 Genome sequencing

| PRJNA53615 | ENA

Staphylococcus aureus subsp. aureus 21193

Project description:Staphylococcus aureus subsp. aureus 21193 Genome sequencing

| PRJNA53605 | ENA

Staphylococcus aureus subsp. aureus 21195

Project description:Staphylococcus aureus subsp. aureus 21195 Genome sequencing

| PRJNA53609 | ENA

Staphylococcus aureus subsp. aureus 21204

Project description:Staphylococcus aureus subsp. aureus 21204 Genome sequencing

| PRJNA53619 | ENA

Staphylococcus aureus subsp. aureus CK36

Project description:Staphylococcus aureus subsp. aureus CK36 Genome sequencing

| PRJNA158333 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data