Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Loa loa

ABSTRACT: Loa loa Raw sequence reads

PROVIDER: PRJNA284515 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR3136722_1.fastq.gz	Fastqsanger.gz
	SRR3136722_2.fastq.gz	Fastqsanger.gz
	SRR3136972_1.fastq.gz	Fastqsanger.gz
	SRR3136972_2.fastq.gz	Fastqsanger.gz
	SRR3136723_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Loa loa

Project description:Loa loa transcriptome sequencing project

| PRJNA60555 | ENA

Regulation of global gene expression in human Loa loa infection is a function of chronicity

2011-11-24 | GSE31894 | GEO

Loa loa strain:NA

Project description:Loa loa genome sequencing project

| PRJNA37757 | ENA

Loa loa isolate:DRC

Project description:Loa loa isolate:DRC Genome sequencing

| PRJNA479826 | ENA

Regulation of global gene expression in human Loa loa infection is a function of chronicity

Project description:Differential gene expression to parasite and nonparasite antigen was seen in infected patients with lifelong exposure to the human filarial parasite Loa loa (endemics) compared with patients who became infected due to temporary residence or travel in an endemic country (expatriates). CD4+ and CD8+ cells were isolated; comparison was done between unstimulated cells from 2 patient groups and between parasite microfilarial (MfAg) and nonparasite streptolysin O (SLO) antigen-stimulated cells with unstimulated cells; Technical replicates (2 unstimulated; 2 each antigen)

2011-11-24 | E-GEOD-31894 | biostudies-arrayexpress

Loa loa strain:patient-derived (Cameroon)

Project description:Loa loa strain:patient-derived (Cameroon) Genome sequencing

| PRJNA901960 | ENA

Loa loa isolate:CAT

Project description:Single Molecule Sequencing and Genome Assembly of a Clinical Specimen of Loa loa, the Causative Agent of Loiasis

| PRJNA246086 | ENA

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

Mauna Loa Lava Tube Secondary Minerals

Project description:Metagenome Assembled Genomes from Mauna Loa Lava Tube Secondary Minerals

| PRJNA818798 | ENA

Quantitative profiling of differentially expressed miRNAs in siCTL- and siOASL-transfected HUVECs

Project description:Purpose: The goal of this study is to compare endothelial small RNA transcriptome to identify the target of OASL under basal or stimulated conditions by utilizing miRNA-seq. Methods: Endothelial miRNA profilies of siCTL or siOASL transfected HUVECs were generated by illumina sequencing method, in duplicate. After sequencing, the raw sequence reads are filtered based on quality. The adapter sequences are also trimmed off the raw sequence reads. rRNA removed reads are sequentially aligned to reference genome (GRCh38) and miRNA prediction is performed by miRDeep2. Results: We identified known miRNA in species (miRDeep2) in the HUVECs transfected with siCTL or siOASL. The expression profile of mature miRNA is used to analyze differentially expressed miRNA(DE miRNA). Conclusions: Our study represents the first analysis of endothelial miRNA profiles affected by OASL knockdown with biologic replicates.

2022-09-06 | GSE186354 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data