Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Marine sediment metagenome

ABSTRACT: Denitrifying communities in marine sediments incubated under different oxygen regimes.

PROVIDER: PRJNA284838 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2913181.fastq.gz	Fastqsanger.gz
	SRR2919211.fastq.gz	Fastqsanger.gz
	SRR2913182.fastq.gz	Fastqsanger.gz
	SRR2913192.fastq.gz	Fastqsanger.gz
	SRR2919213.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Survey functional genes in Arctic marine sediment communities

Project description:The objective was to identify functional genes encoded by Fungi and fungal-like organisms to assess putative ecological roles Using the GeoChip microarray, we detected fungal genes involved in the complete assimilation of nitrate and the degradation of lignin, as well as evidence for Partitiviridae (a mycovirus) that likely regulates fungal populations in the marine environment. These results demonstrate the potential for fungi to degrade terrigenously-sourced molecules, such as permafrost and compete with algae for nitrate during blooms. Ultimately, these data suggest that marine fungi could be as important in oceanic ecosystems as they are in freshwater environments.

2020-07-14 | GSE117831 | GEO

Biological effects of marine contaminated sediments on Sparus aurata juveniles

Project description:Chemical analysis of the compounds present in sediment, although informative, often is not indicative of the downstream biological effects that these contaminants exert on resident aquatic organisms. More direct molecular methods are needed to determine if marine life is affected by exposure to sediments. In this study, we used an aquatic multispecies microarray and q-PCR to investigate the effects on gene expression in juvenile sea bream (Sparus aurata) of two contaminated sediments defined as sediment 1 and 2 respectively, from marine areas in Northern Italy.

2011-01-01 | E-TABM-1146 | biostudies-arrayexpress

Exoproteomes of marine cyanobacteria grown under different regimes to detect their pili production; analysed by LC-MS/MS

Project description:Exoproteomes generated from Synechococcus sp. WH7803 and Prochlorococcus sp. MIT9313 cultures grown under different nutrient, light and temperature conditions. The aim was to see how the production of the pili were affected. Exoproteomes of marine Prochlorococcus under different growth regimes analysed by LC-MS/MS

2021-02-24 | PXD018395 | Pride

Exoproteomes of marine cyanobacteria grown under different regimes to detect their pili production; analysed by LC-MS/MS

Project description:Exoproteomes generated from Synechococcus sp. WH7803 and Prochlorococcus sp. MIT9313 cultures grown under different nutrient, light and temperature conditions. The aim was to see how the production of the pili were affected. Exoproteomes of marine Synechococcus under different nutrient regimes analysed by LC-MS/MS

2021-02-24 | PXD018396 | Pride

Exoproteomes of marine cyanobacteria grown under different regimes to detect their pili production; analysed by LC-MS/MS

Project description:Exoproteomes generated from Synechococcus sp. WH7803 and Prochlorococcus sp. MIT9313 cultures grown under different nutrient, light and temperature conditions. The aim was to see how the production of the pili were affected. Exoproteomes of marine Synechococcus under different light regimes analysed by LC-MS/MS

2021-02-24 | PXD018524 | Pride

marine sediment metagenome

Project description:Bacterial community from different marine sediments, Crete, Greece - itags Metagenome

| PRJNA248019 | ENA

marine sediment metagenome

Project description:hydrocarbon marine sediments

| PRJNA383383 | ENA

marine sediment metagenome

Project description:Coastal marine sediments Metagenome

| PRJNA207694 | ENA

marine sediment metagenome

Project description:marine sediments Targeted loci environmental