Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Thermomyces lanuginosus

ABSTRACT: Transcriptome Analysis of Avicel Utilization by Thermomyces lanuginosus

PROVIDER: PRJNA286684 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2059702_1.fastq.gz	Fastqsanger.gz
	SRR2059702_2.fastq.gz	Fastqsanger.gz
	SRR2059703_1.fastq.gz	Fastqsanger.gz
	SRR2059703_2.fastq.gz	Fastqsanger.gz
	SRR2059704_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Transcriptome Analysis of Avicel Utilization by Thermomyces lanuginosus

Project description:Thermomyces lanuginosus is a thermophilic fungus whose genome encodes many carbohydrate-active enzymes involved in Avicel degradation. This study examined and compared the transcriptomes of T. lanuginosus during cultivation on Avicesl or glucose. We identified approximately 4485 genes that showed expression differences when T. lanuginosus was cultured on Avicel compared to glucose. Functional annotation of up-regulated genes showed enrichment for proteins predicted to be involved in Avicel degradation, but also many genes encoding proteins of unknown function. Our study represents the first analysis of transcriptomes, with biologic replicates, generated by RNA-seq technology. We conclude that RNA-seq based transcriptome characterization would expedite genetic network analyses and permit the dissection of complex biologic functions.

2015-06-17 | GSE69763 | GEO

Transcriptome Analysis of Avicel Utilization by Thermomyces lanuginosus

2015-06-17 | E-GEOD-69763 | biostudies-arrayexpress

Thermomyces lanuginosus SSBP

Project description:Thermomyces lanuginosus SSBP Genome sequencing and assembly

| PRJNA88097 | ENA

Thermomyces lanuginosus strain:ATCC200065

Project description:Thermomyces lanuginosus strain:ATCC200065 Transcriptome or Gene expression

| PRJNA213840 | ENA

Thermomyces lanuginosus strain:0065

Project description:Thermomyces lanuginosus strain:0065 Raw sequence reads

| PRJNA842093 | ENA

Thermomyces lanuginosus strain:ATCC 200065

Project description:Thermomyces lanuginosus strain:ATCC 200065 Genome sequencing

| PRJNA1064963 | ENA

Proteomics of Thermomyces lanuginosus and Thermobifida fusca

Project description:A lable-free quantitative proteomics method was employed to study the difference of Thermomyces lanuginosus and Thermobifoda fusca when they grown different carbon sources

2020-03-04 | PXD017874 |

T. lanuginosus SSBP genome

Project description:Genome sequencing of Thermomyces lanuginosus SSBP

| PRJEB620 | ENA

Thermomyces dupontii

Project description:Thermomyces dupontii P450S and P450L Transcriptome

| PRJNA977981 | ENA

Thermomyces lanuginosus

Project description:Non-cellulolytic thermophilic fungus

| PRJNA88653 | ENA