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Salmonella enterica subsp. indica str. ATCC BAA-1578

ABSTRACT: Subspecies VI strain for comparative analysis

PROVIDER: PRJNA28773 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR520425.fastq.gz	Fastqsanger.gz
	SRR520426.fastq.gz	Fastqsanger.gz
	SRR520460.fastq.gz	Fastqsanger.gz
	SRR520461.fastq.gz	Fastqsanger.gz
	SRR520463.fastq.gz	Fastqsanger.gz

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Project description:Salmonella enterica spp. are pathogenic bacteria commonly associated with food-borne outbreaks in human and animals. Salmonella enterica spp. are characterized into more than 2,500 different serotypes, which makes epidemiological surveillance and outbreak control more difficult. In this report, we announce the first complete genome and methylome sequences from two Salmonella type strains associated with food-borne outbreaks, Salmonella enterica subsp. enterica serovar Panama (ATCC 7378) and Salmonella enterica subsp. enterica serovar Sloterdijk (ATCC 15791).

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Complete genome sequence of Salmonella enterica subspecies arizonae str. RKS2983.

Project description:Salmonella arizonae (also called Salmonella subgroup IIIa) is a Gram-negative, non-spore-forming, motile, rod-shaped, facultatively anaerobic bacterium. S. arizonae strain RKS2983 was isolated from a human in California, USA. S. arizonae lies somewhere between Salmonella subgroups I (human pathogens) and V (also called S. bongori; usually non-pathogenic to humans) and so is an ideal model organism for studies of bacterial evolution from non-human pathogen to human pathogens. We hence sequenced the genome of RKS2983 for clues of genomic events that might have led to the divergence and speciation of Salmonella into distinct lineages with diverse host ranges and pathogenic features. The 4,574,836 bp complete genome contains 4,203 protein-coding genes, 82 tRNA genes and 7 rRNA operons. This genome contains several characteristics not reported to date in Salmonella subgroup I or V and may provide information about the genetic divergence of Salmonella pathogens.

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