Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mouse gut metagenome

ABSTRACT: Metagenomic study of the effect of probiotics on hepatocellular tumor growth in mice

PROVIDER: PRJNA293255 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2174320_1.fastq.gz	Fastqsanger.gz
	SRR2174320_2.fastq.gz	Fastqsanger.gz
	SRR2174321_1.fastq.gz	Fastqsanger.gz
	SRR2174321_2.fastq.gz	Fastqsanger.gz
	SRR2174313_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

mouse gut metagenome

Project description:Metagenomic study of the effect of Lactobacillus paracasei K71 on ob/ob mice

| PRJDB7113 | ENA

mouse gut metagenome

Project description:Effect of probiotics on Gardnerella vaginalis infection

| PRJNA1031006 | ENA

mouse gut metagenome

Project description:The effect of multi-strain probiotics on DIO mouse

| PRJNA722813 | ENA

Targeting gut microbiota in Kras wild-type and G12D mutated pancreatic cancer mice

Project description:FastQ files from 16S sequencing of fecal samples from pancreatic cancer xenografted mice not treated (CTRL) and treated with chemotherapy (GEM+nab-PTX), probiotics (PRO) and chemotherapy + probiotics (GEM+nab-PTX+PRO)

2024-09-14 | E-MTAB-12171 | biostudies-arrayexpress

A probiotics strain attenuating the effects of aspirin in the gut

Project description:Transcriptome analysis of partially degraded and fragmented RNA samples from mus musculus gut Global gene expression profiling has shown the gut transcripts changes through administration of aspirin while probiotics strain administration beforehand attenuates the effect more than teprenone. We analyzed five groups of mice gut using the Affymetrix Mouse Gene 1.0 ST platform. Array data was processed by Affymetrix Exon Array Computational Tool. No techinical replicates were performed.

2014-01-07 | E-GEOD-53851 | biostudies-arrayexpress

mouse gut metagenome

Project description:Metagenomic data of mice

| PRJNA646351 | ENA

A probiotics strain attenuating the effects of aspirin in the gut

2014-01-07 | GSE53851 | GEO

human gut metagenome

Project description:Probiotics in Pregnancy study

| PRJNA345144 | ENA

mouse gut metagenome

Project description:Study on the effect of pancrelipase on the composition of intestinal microbiota in mice

| PRJDB6128 | ENA

Pharmacokinetic modeling and gene sequencing reveal the interplay between B vitamins and probiotics

Project description:The pharmacological significance of B vitamins, essential for various metabolic processes, and the therapeutic potential of probiotics in gastrointestinal health have been well-documented. However, the interactions between these entities remain poorly understood. In this study, we endeavored to elucidate the potential interplay between B vitamins and probiotics utilizing liquid chromatography-triple quadrupole mass spectrometry, pharmacokinetic modeling, and 16S rRNA gene sequencing. Employing healthy and pseudo-germ-free rat models, we revealed that probiotics significantly improve the absorption of B1, B3, B5, and B12, and that the gut microbiota played a mediating role in this enhanced absorption of B vitamins by probiotics. High-throughput genetic sequencing uncovered a synergistic effect of B vitamins and probiotics in modulating the gut microbiota, particularly increasing the abundance of Verrucomicrobia and Akkermansia. Furthermore, in vitro experiments demonstrated that probiotics used in this study had a relatively minor influence on the production and permeability of B vitamins, while B vitamins did not significantly contribute to the growth, auto-aggregation, and adhesion of probiotics. In summary, a complex network connection exists between B vitamins and probiotics, wherein the gut microbiota emerges as a pivotal factor that cannot be overlooked.

2024-07-31 | GSE253146 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data