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Xerophyta viscosa

ABSTRACT: Xerophyta viscosa Transcriptome or Gene expression

PROVIDER: PRJNA295811 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR2420275.fastq.gz	Fastqsanger.gz
	SRR2420277.fastq.gz	Fastqsanger.gz
	SRR2420278.fastq.gz	Fastqsanger.gz
	SRR2420279.fastq.gz	Fastqsanger.gz
	SRR5395102.fastq.gz	Fastqsanger.gz

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Project description:Moritella viscosa is a bacterial pathogen causing winter-ulcer disease in Atlantic salmon. The lesions on affected fish lead to increased mortality, decreased fish welfare, and inferior meat quality in farmed salmon. MicroRNAs (miRNAs) are small non-coding RNAs involved in post-transcriptional regulation by guiding the miRNA induced silencing complex to specific mRNA transcripts (target genes). The goal of this study was to identify miRNAs responding to Moritella viscosa in salmon by investigating miRNA expression in head-kidney and the muscle/skin from lesion sites caused by the pathogen. Protein coding gene expression was investigated by microarray analysis in the same materials.

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