Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Yersinia kristensenii

ABSTRACT: Environmental bacterium

PROVIDER: PRJNA29967 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ACCA01.dat.gz	Other
	ACCA01.fasta.gz	Fasta.gz
	ACCA01.master.dat	Other
	JAVIYH01.dat.gz	Other

Items per page:

1 - 5 of 25

Similar Datasets

Draft Genome Sequences of Six Yersinia kristensenii Strains.

Project description:Yersinia kristensenii is one of the Yersinia enterocolitica-like bacterial species, which are considered nonpathogenic to humans. In this work, we reported the draft genome sequences of six Yersinia kristensenii strains. These draft genomes will help to better characterize Yersinia kristensenii at the genomic level.

| S-EPMC8759387 | biostudies-literature

Yersinia kristensenii

Project description:Yersinia kristensenii Genome sequencing and assembly

| PRJNA1012314 | ENA

Yersinia frederiksenii

Project description:Environmental bacterium

| PRJNA29863 | ENA

Draft Genome Sequences of Yersinia frederiksenii, Yersinia intermedia, and Yersinia kristensenii Strains from Brazil.

Project description:Yersinia enterocolitica-like strains are usually understudied. In this work, we reported the draft genome sequences of two Yersinia frederiksenii, two Yersinia intermedia, and two Yersinia kristensenii strains isolated from humans, animals, food, and the environment in Brazil. These draft genomes will provide better molecular characterizations of these species.

| S-EPMC5552991 | biostudies-other

Yersinia kristensenii 490

Project description:Isolated from a hare in France

| PRJNA29761 | ENA

Yersinia kristensenii 105

Project description:Isolate from Denmark

| PRJNA29759 | ENA

Yersinia pseudotuberculosis

Project description:Environmental bacterium that causes gastrointestinal disease

| PRJNA16072 | ENA

The CDI toxin of Yersinia kristensenii is a novel bacterial member of the RNase A superfamily.

Project description:Contact-dependent growth inhibition (CDI) is an important mechanism of inter-bacterial competition found in many Gram-negative pathogens. CDI+ cells express cell-surface CdiA proteins that bind neighboring bacteria and deliver C-terminal toxin domains (CdiA-CT) to inhibit target-cell growth. CDI+ bacteria also produce CdiI immunity proteins, which specifically neutralize cognate CdiA-CT toxins to prevent self-inhibition. Here, we present the crystal structure of the CdiA-CT/CdiIYkris complex from Yersinia kristensenii ATCC 33638. CdiA-CTYkris adopts the same fold as angiogenin and other RNase A paralogs, but the toxin does not share sequence similarity with these nucleases and lacks the characteristic disulfide bonds of the superfamily. Consistent with the structural homology, CdiA-CTYkris has potent RNase activity in vitro and in vivo. Structure-guided mutagenesis reveals that His175, Arg186, Thr276 and Tyr278 contribute to CdiA-CTYkris activity, suggesting that these residues participate in substrate binding and/or catalysis. CdiIYkris binds directly over the putative active site and likely neutralizes toxicity by blocking access to RNA substrates. Significantly, CdiA-CTYkris is the first non-vertebrate protein found to possess the RNase A superfamily fold, and homologs of this toxin are associated with secretion systems in many Gram-negative and Gram-positive bacteria. These observations suggest that RNase A-like toxins are commonly deployed in inter-bacterial competition.

| S-EPMC5435912 | biostudies-literature

Yersinia kristensenii ATCC 33638

Project description:Isolated from human urine

| PRJNA29757 | ENA

Yersinia kristensenii WA 948

Project description:Human isolate from Finland

| PRJNA29763 | ENA