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Perinereis aibuhitensis

ABSTRACT: Perinereis aibuhitensis overview

PROVIDER: PRJNA301378 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR19383290_1.fastq.gz	Fastqsanger.gz
	SRR19383290_2.fastq.gz	Fastqsanger.gz
	SRR19383291_1.fastq.gz	Fastqsanger.gz
	SRR19383291_2.fastq.gz	Fastqsanger.gz
	SRR19383292_1.fastq.gz	Fastqsanger.gz

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Perinereis aibuhitensis

Project description:Perinereis aibuhitensis Clone ends

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Perinereis aibuhitensis

Project description:Perinereis aibuhitensis Raw sequence reads

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Perinereis aibuhitensis

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Perinereis aibuhitensis

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Perinereis

Project description:Sequencing of novel RNA viruses from Perinereis

| PRJNA1088991 | ENA

Project description:RNA-Sequencing of Perinereis aibuhitensis under Cu and Cd stress

| PRJNA853479 | ENA

Molecular characterization of G-protein-coupled receptor (GPCR) and protein kinase A (PKA) cDNA in <i>Perinereis aibuhitensis</i> and expression during benzo(a)pyrene exposure.

Project description:BackgroundG-protein-coupled receptors (GPCRs) are one of the most important molecules that transfer signals across the plasma membrane, and play central roles in physiological systems. The molecular architecture of GPCRs allows them to bind to diverse chemicals, including environmental contaminants.MethodsTo investigate the effects of benzo(a)pyrene (B(a)P) on GPCR signaling, GPCR and the protein kinase A (PKA) catalytic subunit of Perinereis aibuhitensis were cloned. The expression patterns of these two genes during B(a)P exposure were determined with real-time fluorescence quantitative PCR. The PKA content in P. aibuhitensis under B(a)P exposure was examined.ResultsThe full-length cDNAs of PaGPCR and the PaPKA catalytic subunit were 1,514 and 2,662 nucleotides, respectively, encoding 338 and 350 amino acids, respectively. Multiple sequence alignments indicated that the deduced amino acid sequence of PaGPCR shared a low level of similarity with the orphan GPCRs of polychaetes and echinoderms, whereas PaPKA shared a high level of identify with the PKA catalytic subunits of other invertebrates. B(a)P exposure time-dependently elevated the expression of PaGPCR and PaPKA. The expression of both PaGPCR and PaPKA was also dose-dependent, except at a dose of 10 μg/L B(a)P. The PKA content in concentration group was elevated on day 4, with time prolonging the PKA content was down-regulated to control level.DiscussionThese results suggested that GPCR signaling in P. aibuhitensis was involved in the polychaete's response to environmental contaminants.

| S-EPMC6876487 | biostudies-literature

A new species of Perinereis (Polychaeta, Nereididae) from Florida, USA, with a key to all Perinereis from the American continent.

Project description:Specimens belonging to a new species of Perinereis Kinberg, 1865 were collected fromnatural oyster reefs in an estuarine environmenton Florida's southwest coast. The genus Perinereis includes more than 70 species, of which, Perinereis aibuhitensis (Grube, 1878), Perinereis brevicirrata (Treadwell, 1920), Perinereis camiguinoides (Augener, 1922), Perinereis jascooki Gibbs, 1972, Perinereis kuwaitensis Mohammad, 1970, Perinereis singaporiensis (Grube, 1878), Perinereis vancaurica (Ehlers, 1868) and the new species have two short bars on Area VI and notopodial dorsal ligules that are not greatly expanded. The most geographically close species is Perinereis brevicirrata. The new species can be distinguished from Perinereis brevicirrata by the absence of a notopodial prechaetal lobe, Area V with 3 cones in a triangle, and Area VII-VIII with two well-defined rows of 33 paragnaths, the basal row having longer paragnaths in relation to the distal ones. The new species resembles Perinereis singaporiensis based on the absence of notopodial prechaetal lobe; however, the two species differ in some morphological characteristics such as tentacular cirri length, shape of dorsal notopodial ligules, and falciger blades. A key to all American species of Perinereis is included.

| S-EPMC3698562 | biostudies-literature

Project description:Pacific oyster Crassostrea gigas (Bivalvia, Mollusca), Pacific abalone Haliotis discus hannai (Gastropoda, Mollusca), and the sand worm Perinereis aibuhitensis (Polychaeta, Annelida) Raw sequence reads

| PRJNA277901 | ENA

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