Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Wetland metagenome

ABSTRACT: Tibetan Plateau alpine wetland methanogenic archaea Genome sequencing

PROVIDER: PRJNA308785 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR3101227.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Metagenomic analysis revealed the microbial-mediated soil organic carbon loss under the degeneration succession in alpine meadow

Project description:Land cover change has long been recognized that marked effect the amount of soil organic carbon. However, little is known about microbial-mediated effect processes and mechanism on soil organic carbon. In this study, the soil samples in a degenerated succession from alpine meadow to alpine steppe meadow in Qinghai-Tibetan Plateau degenerated, were analyzed by using GeoChip functional gene arrays.

2017-01-05 | GSE93158 | GEO

Tibetan Plateau wetland metagenome

Project description:Tibetan Plateau wetland metagenome Raw sequence reads

| PRJNA744994 | ENA

Comparative proteomics analysis reveals the adaptation strategies of the alpine plant Potentilla saundersiana along the altitude gradient of the Northwestern Tibetan Plateau

Project description:The altitude gradient limits the growth and distribution of alpine plants.Alpine plants have developed strategies to survive the extremely cold conditions prevailing at high altitudes; however, the mechanism underlying the evolution of these strategies remains unknown. The alpine plant Potentilla saundersiana is widespread in the Northwestern Tibetan Plateau. In this study, we conducted a comparative proteomics analysis to investigate the dynamic patterns of protein expression of P. saundersiana located at five different altitudes. We detected and functionally characterized 118 differentially expressed proteins. Our study confirmed that increasing levels of antioxidant proteins, and their respective activities, and accumulation of primary metabolites, such as proline and sugar, confer tolerance to the alpine environment in P. saundersiana. Proteins species associated with the epigenetic regulation of DNA stability and post-translational protein degradation were also involved in this process. Furthermore, our results showed that P. saundersiana modulated the root architecture and leaf phenotype to enhance adaptation to alpine environmental stress through mechanisms that involved hormone synthesis and signal transduction, particularly the cross-talk between auxin and strictosidine. Based on these findings, we conclude that P. saundersiana uses multiple strategies to adapt to the high-altitude environment of the Northwestern Tibetan Plateau.

2022-02-22 | PXD001112 | Pride

The microbial functional diversity in response to altered precipitation on Tibet Plateau as characterized by GeoChip

Project description:Global warming substantially changes precipitation patterns in the Tibetan plateau, with projection of increased precipitation in southern and northern Tibet but decreased precipitation in the center. Understanding mechanisms of such changes in greenhouse gas emissions is of vital importance in predicting ecosystem feedbacks to climate changes. Nonetheless, it has been hampered by limited knowledge in soil microbial communities, one of the major drivers of greenhouse gas emission. Here, we report a field experiment simulating drying and wetting conditions in the Tibetan grassland. Our field site is located at the Haibei Alpine Grassland Ecosystem Research Station in the northeast of Tibet Plateau, China, and we employed GeoChip 5.0 180K to analyze microbial responses.

2016-05-28 | GSE82006 | GEO

The microbial functional diversity in response to altered precipitation on Tibet Plateau as characterized by GeoChip

2016-05-28 | E-GEOD-82006 | biostudies-arrayexpress

Archaea in wetland soils and sediments from the Tibetan Plateau

Project description:Archaea in wetland soils and sediments from the Tibetan Plateau Raw sequence reads

| PRJNA813369 | ENA

Using the Daphnia magna Transcriptome to Distinguish Water Source: Wetland and Stormwater Case Studies

Project description:Investigation of mRNA expression (using HiSeq 2500) in response to treatment of Daphnia magna to pyriproxyfen, wetland water, or stormwater samples.

2022-07-26 | GSE208591 | GEO

wetland metagenome

Project description:Archaea communities in wetland sediments and soils

| PRJNA382485 | ENA

wetland metagenome

Project description:Archaea in the bioflim of a constructed wetland

| PRJNA317254 | ENA

wetland metagenome

Project description:archaea in the soil of a constructed wetland

| PRJNA316489 | ENA