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Pareuchiloglanis macrotrema

ABSTRACT: Pareuchiloglanis macrotrema overview

PROVIDER: PRJNA316351 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR15334817_1.fastq.gz	Fastqsanger.gz
	SRR15334817_2.fastq.gz	Fastqsanger.gz
	SRR15334818_1.fastq.gz	Fastqsanger.gz
	SRR15334818_2.fastq.gz	Fastqsanger.gz
	SRR15334819_1.fastq.gz	Fastqsanger.gz

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Project description:Pareuchiloglanis feae is mainly distributed in Irrawaddy (China and Myanmar), Salween (China and Myanmar), and the Yangtze River drainage areas. In this study, the complete mitochondrial genome of P. feae, which has a circular structure of 16,863 bp, including 13 protein-coding genes, 2 ribosomal RNA (rRNA), 22 transfer RNA (tRNA) genes, and a non-coding control region (D-loop), is being reported for the first time. The A, T, C, and G content were 31.36, 15.69, 28.04, and 24.91%, respectively. Bayesian inference and maximum likelihood method showed that P. feae clustered with P. anteanalis and P. sichuanensis. Our results provide further information and references for clarifying the phylogenetic relationships within Glyptosternoid fishes.

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The complete mitochondrial genome of Pareuchiloglanis gongshanensis (Siluriformes, Sisoridae, Pareuchiloglanis): genome characterization and phylogenetic analysis.

Project description:Pareuchiloglanis gongshanensis, a small-sized benthic fish, distributed in southwest China. In the present study, the complete mitochondrial genome of P. gongshanensis was sequenced to be 16 588 bp in length, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, a control region and the origin of the light strand replication. The overall nucleotide composition was 30.70% A, 24.11% T, 29.16% C and 16.02% G, with an A + T bias of 54.82%. The gene composition and the structural arrangement of the P. gongshanensis complete mitochondrial DNA were identical to most of the other vertebrates. This will provide a useful tool for understanding the genetic diversity, population structure and conservation status of P. gongshanensis in the future.

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