Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sebastes rastrelliger

ABSTRACT: Population genomics of grass rockfish

PROVIDER: PRJNA316872 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4037263_1.fastq.gz	Fastqsanger.gz
	SRR4037263_2.fastq.gz	Fastqsanger.gz
	SRR4037483_1.fastq.gz	Fastqsanger.gz
	SRR4037483_2.fastq.gz	Fastqsanger.gz
	SRR4037484_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 240

Similar Datasets

Sebastes melanops array 5K v1

Project description:We used a reference design with a dye swap. We used 6 experimental probes grouped by treatment and sample day. "Treatment" fish consisted of rockfish exposed to forced decompression resulting in barotrauma, followed by subsequent recompression to their original depth. Control fish did not experience forced decompression. Fish were sampled at day 3, day 15 and day 31 post-decompression.

2012-01-02 | E-MEXP-3087 | biostudies-arrayexpress

Project description:Deacon rockfish population genomics

| PRJNA560239 | ENA

Sebastes

Project description:Cooperative research sheds light on population structure and listing status of threatened and endangered rockfish species

| PRJNA451040 | ENA

Sebastes caurinus

Project description:Copper Rockfish (Sebastes caurinus) Genome sequencing and assembly

| PRJNA674327 | ENA

Sebastes maliger

Project description:Quillback Rockfish (Sebastes maliger) Genome sequencing and assembly

| PRJNA674328 | ENA

Sebastes schlegelii

Project description:Transcriptome Profiles in Macrophages of Black Rockfish (Sebastes schlegelii)

| PRJNA953922 | ENA

Project description:Malagasy Grass Diversity Population Genomics

| PRJNA952819 | ENA

Sebastes spp.

Project description:genome-wide markers for the cryptic sister species, sunset and vermilion rockfish

| PRJNA721730 | ENA

Acute effects of high pCO2 and hypoxia on gene expression in blue rockfish (Sebastes mystinus)

Project description:We sequenced complementary DNA created from white muscle messenger RNA in juvenile blue rockfish and performed a differential gene expression analysis to describe the fishes' responses to the global change-related stressors of high pCO2 (low pH) and hypoxia (low dissolved oxygen, DO). To examine gene expression over ecologically realistic timescales that emulate the duration of spring upwelling events in the California Current ecosystem, we collected and sequenced samples after 12 h, 24 h and two weeks of exposure to four treatments: control (pH≈8.0, pCO2≈400μatm, DO≈8 mg/L), high pCO2 (pH≈7.6, pCO2≈1200μatm, DO≈8 mg/L), hypoxic (pH≈8.0, pCO2≈400μatm, DO≈4 mg/L), and combined high pCO2/hypoxic (pH≈7.6, pCO2≈1200μatm, DO≈4 mg/L).

2019-09-30 | GSE129003 | GEO

Sebastes umbrosus isolate:fSebUmb1

Project description:Sebastes umbrosus (Honeycomb rockfish) genome, fSebUmb1, primary haplotype

| PRJNA562005 | ENA