Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Kosakonia oryzae strain:CGMCC 1.7012 | isolate:CGMCC 1.7012

ABSTRACT: Enterobacter oryzae CGMCC 1.7012 genome sequencing

PROVIDER: PRJNA323114 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4217681_1.fastq.gz	Fastqsanger.gz
	SRR4217681_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Xaviernesmea oryzae strain:cgmcc 1.7048

Project description:Rhizobium oryzae CGMCC 1.7048 genome sequencing

| PRJNA303536 | ENA

Xanthomonas oryzae pv. oryzae (Indian Isolate): Wild type vs. rpfF mutant

Project description:Transcription profiling of the DSF regulon in Xanthomonas oryzae pv. oryzae (Xoo) using wild type and the rpfF mutant. Cell-cell signaling mediated by the quorum sensing molecule known as Diffusible Signaling factor (DSF) is required for virulence of Xanthomonas group of plant pathogens. DSF in different Xanthomonas and the closely related plant pathogen Xylella fastidiosa regulates diverse traits in a strain specific manner. The transcriptional profiling performed in this study is to elucidate the traits regulated by DSF from the Indian isolate of Xanthomonas oryzae pv. oryzae, which exhibits traits very different from other Xanthomonas group of plant pathogen. In this study, transcription analysis was done between a wild type Xanthomonas oryzae pv. oryzae strain and an isogenic strain that has a mutation in the DSF biosynthetic gene rpfF.

2011-04-02 | GSE27809 | GEO

Kosakonia oryzae strain:D4

Project description:Kosakonia oryzae D4 genome sequencing

| PRJNA323216 | ENA

Kosakonia oryzae

Project description:Kosakonia oryzae overview

| PRJNA309098 | ENA

Xanthomonas oryzae pv. oryzae (Indian Isolate): Wild type vs. rpfF mutant

2011-04-02 | E-GEOD-27809 | biostudies-arrayexpress

Kosakonia oryzae strain:KO348

Project description:Kosakonia oryzae strain:KO348 Genome sequencing and assembly

| PRJNA275839 | ENA

Kosakonia sacchari strain:CGMCC 1.12102

Project description:Kosakonia sacchari strain:CGMCC 1.12102 Genome sequencing

| PRJNA255606 | ENA

Kosakonia oryzae strain:Ola 51

Project description:Kosakonia oryzae strain:Ola 51 Genome sequencing

| PRJNA309028 | ENA

Expression data from susceptible rice cultivar innoculated with Magnaporthe oryzae isolate (Mo-ei-11)

Project description:The molecular mechanisms underlying infection of rice host system with compatible M. oryzae isolates at 12, 24, 48 and 72 hours post innoculation (hpi) are investigated in the study. In addition, the identification of highly commonly upregulated genes by both isolates of M. oryzae may be useful candidates for M.oryzae inducible promoter characterization We used microarrays to detail the global programme of gene expression underlying M. oryzae infection during compatible host-pathogen interaction

2018-02-28 | GSE95394 | GEO

Rice roots: Non-colonized (sterile) control vs. infected with Xanthomonas oryzae pv. oryzae strain PXO99 (Xan)

Project description:Transcriptional profiling of Oryza sativa japonica Nipponbare roots after 14 days post infection with Xanthomonas oryzae pv. oryzae strain PXO99 , the goal is to understand the transcriptomic response of rice roots to colonization by bacterial pathogen

2019-09-01 | GSE136706 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data