Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Halomonas caseinilytica strain:Sharm

ABSTRACT: Halomonas sinaiensis Sharm genome sequencing

PROVIDER: PRJNA323267 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4187671_1.fastq.gz	Fastqsanger.gz
	SRR4187671_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Halomonas caseinilytica

Project description:Halomonas sinaiensis overview

| PRJNA499150 | ENA

Halomonas caseinilytica

Project description:Halomonas caseinilytica overview

| PRJNA303919 | ENA

Halomonas caseinilytica strain:K4

Project description:Halomonas caseinilytica strain:K4 Genome sequencing and assembly

| PRJNA313376 | ENA

Halomonas caseinilytica strain:WD26

Project description:Halomonas caseinilytica strain:WD26 Genome sequencing and assembly

| PRJNA271216 | ENA

Halomonas caseinilytica strain:cgmcc 1.6773

Project description:Halomonas caseinilytica CGMCC 1.6773 genome sequencing

| PRJNA303472 | ENA

Baseline Proteomics Characterisation of Biomanufacturing Organism Halomonas Bluephagenesis

Project description:Biomanufacturing remains financially uncompetitive with the lower cost but higher carbon emitting hydrocarbon based chemical industry. Novel chassis organisms may enable cost reductions with respect to traditional chassis such as E. coli and so open an economic rout to low emission biomanufacturing. Extremophile bacteria exemplify that potential. Salt tolerant halomonas species thrive in conditions inimical to other organisms. Their adoption would eliminate the cost of sterilising equipment. Novel chassis are inevitably poorly understood in comparison to established organisms. Rapid characterisation and community data sharing will facilitate organisms’ adoption for biomanufacturing. This paper describes baseline proteomics data set for Halomonas bluephagenesis TD01 under active development for biomanufactoring. The data record comprises a newly sequenced genome for the organism; evidence for expression of 1150 proteins (30% of the proteome) including baseline quantification of 1050 proteins (27% of the proteome) and a spectral library enabling re-use for targeted proteomics assays. Protein data is annotated with KEGG Orthology enabling rapid matching of quantitative data to pathways of interest to biomanufacturing.

2022-07-11 | PXD030494 | Pride

Halomonas sp. GT strain:GT

Project description:Halomonas genome sequencing

| PRJNA380028 | ENA

Halomonas hydrothermalis

Project description:Halomonas hydrothermalis genome sequencing

| PRJNA401644 | ENA

Halomonas campaniensis strain:5AG

Project description:Halomonas campaniensis 5AG genome sequencing

| PRJNA332794 | ENA

Halomonas alkaliantarctica strain:CRSS

Project description:Halomonas alkaliantarctica CRSS genome sequencing